RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 HSD17B6O14756 317 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 FABP1P07148 127 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 H2AFB1P0C5Y9 115 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 FTH1P19P0C7X4 201 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 IL15RAQ13261 267 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 FER1L6-AS2Q96M78 137 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 NBASA2RRP1 2371 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 KMT2EQ8IZD2 1858 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 IGKV1-6A0A0C4DH72 117 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
SF1-211ENST00000448404 HKR1P10072 659 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 FAM189A2Q15884 450 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 SFT2D1Q8WV19 159 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 IL1F10Q8WWZ1 152 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 OR2J1Q9GZK6 312 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 HSF4Q9ULV5 492 aa12.66□□□□□ -0.38
SF1-211ENST00000448404 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
SF1-211ENST00000448404 CBR1P16152 277 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 APOBEC3DQ96AK3 386 aaPredicted RBP12.65□□□□□ -0.38
SF1-211ENST00000448404 TRIB1Q96RU8 372 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 MAGT1Q9H0U3 335 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 RGCCQ9H4X1 137 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 ZNF286AQ9HBT8 521 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 HEATR1Q9H583 2144 aaKnown RBP12.65□□□□□ -0.38
SF1-211ENST00000448404 A0A1B0GW55 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 H0YL77 283 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 PLP2Q04941 152 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 TMEM187Q14656 261 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 WDR86Q86TI4 376 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 SLC30A7Q8NEW0 376 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 SCGB3A2Q96PL1 93 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 LINC00470Q9BZP3 86 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 SLC5A7Q9GZV3 580 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 C1orf123Q9NWV4 160 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
SF1-211ENST00000448404 TRBV6-7A0A0A0MS04 114 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 SNAPC5O75971 98 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 C1QL1O75973 258 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 PPYP01298 95 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 CRYBA1P05813 215 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 ACAA1P09110 424 aaPredicted RBP12.64□□□□□ -0.39
SF1-211ENST00000448404 FHITP49789 147 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 FOXF2Q12947 444 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 DHRS11Q6UWP2 260 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 OR1K1Q8NGR3 316 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 NAA60Q9H7X0 242 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 FBXL17Q9UF56 701 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 POLEQ07864 2286 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 ZNF705EA8MWA4 302 aaPredicted RBP12.64□□□□□ -0.39
SF1-211ENST00000448404 APLNRP35414 380 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 TNFSF10P50591 281 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 CEACAM21Q3KPI0 293 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 RBMS3Q6XE24 437 aaKnown RBP12.64□□□□□ -0.39
SF1-211ENST00000448404 P4HA3Q7Z4N8 544 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 CNTNAP3BQ96NU0 1288 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 CNTNAP3Q9BZ76 1288 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 ZDHHC8Q9ULC8 765 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 RRP8O43159 456 aaKnown RBP12.64□□□□□ -0.39
SF1-211ENST00000448404 GNRHRP30968 328 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 EIF3IQ13347 325 aaKnown RBP12.64□□□□□ -0.39
SF1-211ENST00000448404 FBXW9Q5XUX1 488 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 ZNF818PQ6ZRF7 136 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 SVBPQ8N300 66 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 SLC35G3Q8N808 338 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 LOXL4Q96JB6 756 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 BCL2L14Q9BZR8 327 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 GSN-AS1Q9NRJ2 163 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 CCL28Q9NRJ3 127 aa12.64□□□□□ -0.39
SF1-211ENST00000448404 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 RPL36A-HNRNPH2H7BZ11 118 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 SIRPB1O00241 398 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 NDUFS6O75380 124 aaKnown RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 ADCYAP1P18509 176 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 IGHV1-2P23083 117 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 OMGP23515 440 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 RPL12P30050 165 aaKnown RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 TMEM33P57088 247 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 HERV-K104P61576 105 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 CYCSP99999 105 aaKnown RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 NHLH2Q02577 135 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 TMEM268Q5VZI3 342 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 ZNF826PQ6ZT77 177 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 GAPTQ8N292 157 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 OR4A4PQ8NGN8 299 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 ASB13Q8WXK3 278 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 BCL2L2Q92843 193 aaPredicted RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 TRBV23-1A0A0A0MS06 115 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 TMEM218A2RU14 115 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 TPT1P13693 172 aaKnown RBP12.63□□□□□ -0.39
SF1-211ENST00000448404 ZNF44P15621 663 aa12.63□□□□□ -0.39
SF1-211ENST00000448404 DTYMKP23919 212 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms