RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 LHFPL5Q8TAF8 219 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CEP170BQ9Y4F5 1589 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 A0A1B0GX78 115 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CDKN3Q16667 212 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 GSG1Q2KHT4 349 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 DEFB133Q30KQ1 61 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF385CQ66K41 422 aaPredicted RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CCDC144NLQ6NUI1 221 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ZDHHC8Q9ULC8 765 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 MEGF6O75095 1541 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CTXND1A0A1B0GTU2 59 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF840PA6NDX5 716 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CDC14BO60729 498 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 NGFP01138 241 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 POU2AF1Q16633 256 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 RPS19BP1Q86WX3 136 aaKnown RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 OR5AN1Q8NGI8 311 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 OPN4Q9UHM6 478 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CLEC2DQ9UHP7 191 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 TUBD1Q9UJT1 453 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 PPIHO43447 177 aaKnown RBP7.98□□□□□ -1.13
NIPBL-202ENST00000448238 ACRP10323 421 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 DMRTA1Q5VZB9 504 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 OR10S1Q8NGN2 331 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 CACNG4Q9UBN1 327 aa7.98□□□□□ -1.13
NIPBL-202ENST00000448238 PRSS37A4D1T9 235 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ARRDC5A6NEK1 342 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PPLO60437 1756 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MGAT2Q10469 447 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF714Q96N38 554 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PAAF1Q9BRP4 392 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CLEC1BQ9P126 229 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 SETBP1Q9Y6X0 1596 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 TRAV8-4A0A0B4J246 113 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF121P58317 390 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 B4GALNT1Q00973 533 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 EVX2Q03828 476 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PRNTQ86SH4 94 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 H1FOOQ8IZA3 346 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CBLN4Q9NTU7 201 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ZC3H13Q5T200 1668 aaKnown RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CTDSPLO15194 276 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 NAPSAO96009 420 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 B3GALT4O96024 378 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MYOGP15173 224 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CYB5R2Q6BCY4 276 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 OR13H1Q8NG92 308 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM56-RWDD3S4R434 201 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 C7orf77A4D0Y5 90 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 H3BQ15 152 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 M0R082 166 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MALP21145 153 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 DCTDP32321 178 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 LPAR6P43657 344 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 GNG10P50151 68 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CT83Q5H943 113 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 OR52N5Q8NH56 324 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM258P61165 79 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 INSM1Q01101 510 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 LDLRAD3Q86YD5 345 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 OR4D5Q8NGN0 318 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF414Q96IQ9 312 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 OVOL2Q9BRP0 275 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 GHITMQ9H3K2 345 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 C9orf170A2RU37 121 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MKRN2OSH3BPM6 223 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 CFDP00746 253 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PLNP26678 52 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 GPRIN1Q7Z2K8 1008 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 OR4X1Q8NH49 305 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ERRFI1Q9UJM3 462 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 TRAV38-1A0A0B4J264 116 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 C7orf71A4D174 169 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MPZL1O95297 269 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 FAM157BP0CG42 384 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PSG2P11465 335 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MRPS21P82921 87 aaKnown RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 SOX4Q06945 474 aaPredicted RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 IGSF21Q96ID5 467 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 MRGPRX4Q96LA9 322 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 ASCL3Q9NQ33 180 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 HS3ST3A1Q9Y663 406 aa7.97□□□□□ -1.13
NIPBL-202ENST00000448238 PHRF1Q9P1Y6 1649 aaKnown RBP7.97□□□□□ -1.13
NIPBL-202ENST00000448238 VWDEQ8N2E2 1590 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 SELENOTP62341 195 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 PAX2Q02962 417 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 SURF2Q15527 256 aaPredicted RBP7.96□□□□□ -1.13
NIPBL-202ENST00000448238 NRG4Q8WWG1 115 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 NPFFO15130 113 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 ATF1P18846 271 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 CDK5R1Q15078 307 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 DEGS2Q6QHC5 323 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 TMEM86BQ8N661 226 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 C4orf32Q8N8J7 132 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 RGP1Q92546 391 aaPredicted RBP7.96□□□□□ -1.13
NIPBL-202ENST00000448238 ABHD14AQ9BUJ0 271 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 ERCC6L2Q5T890 1561 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 OR2V1Q8NHB1 315 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 FAM222BQ8WU58 562 aa7.96□□□□□ -1.13
NIPBL-202ENST00000448238 ZNF296Q8WUU4 475 aaPredicted RBP7.96□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms