RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 IZUMO4Q1ZYL8 232 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 FAM78AQ5JUQ0 283 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 C17orf47Q8NEP4 570 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 MS4A6EQ96DS6 147 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 SLAMF6Q96DU3 332 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 LAT2Q9GZY6 243 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 SAP30LQ9HAJ7 183 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 PAGE4O60829 102 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 CD40P25942 277 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 S100A4P26447 101 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 KCNAB1Q14722 419 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 EMC4Q5J8M3 183 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 ATOH7Q8N100 152 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 CPEB3Q8NE35 698 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 BADQ92934 168 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 APOBEC3BQ9UH17 382 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 R4GMQ9 66 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 GBF1Q92538 1859 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 TMED7-TICAM2A0A0A6YYA0 188 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 A0A1B0GW15 77 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 LRRC3CA6NJW4 275 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 IDSB3KWA1 339 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 HSPB1P04792 205 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 BCL2P10415 239 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 RPS4Y1P22090 263 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 RPS21P63220 83 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 RIGQ13278 110 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 ASCL4Q6XD76 172 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 OR4D9Q8NGE8 314 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 OR5R1Q8NH85 324 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 OR2T6Q8NHC8 308 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 MRGPRX3Q96LB0 322 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 ZNF355PQ9NSJ1 428 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 KCNE5Q9UJ90 142 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 TMED7Q9Y3B3 224 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 H7C2G1 150 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 PXNP49023 591 aaPredicted RBP8.17□□□□□ -1.1
SMC6-207ENST00000448223 RTL8BQ17RB0 113 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 MRGPRX4Q96LA9 322 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 TAAR6Q96RI8 345 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 GABRG3Q99928 467 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 TMEM147Q9BVK8 224 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 FGF22Q9HCT0 170 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 HSPB7Q9UBY9 170 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 VWA8A3KMH1 1905 aa8.17□□□□□ -1.1
SMC6-207ENST00000448223 TMEM272A0A1B0GTI8 110 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 C19orf67A6NJJ6 358 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 A8MXK9 166 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 MT-ATP6P00846 226 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 IL4P05112 153 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 HOXB2P14652 356 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 FAHP16930 419 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ANKRD55Q3KP44 614 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 PRSS41Q7RTY9 318 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SLC25A42Q86VD7 318 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 BATF2Q8N1L9 274 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 MYOZ3Q8TDC0 251 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ABHD3Q8WU67 409 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 CHST6Q9GZX3 395 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 GPR84Q9NQS5 396 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 AURKAIP1Q9NWT8 199 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 AUP1Q9Y679 476 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ASXL3Q9C0F0 2248 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RANBP2P49792 3224 aaKnown RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 TDRD6O60522 2096 aaKnown RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 DPRXA6NFQ7 191 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SIRPB1O00241 398 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ROM1Q03395 351 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 FAM174AQ8TBP5 190 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RPS4Y2Q8TD47 263 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 C14orf144Q96I85 54 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 COMMD5Q9GZQ3 224 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 TMEM167BQ9NRX6 74 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 OTX1P32242 354 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 DCAF7P61962 342 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 TMEM164Q5U3C3 297 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 METRNLQ641Q3 311 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ZNF770Q6IQ21 691 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 THSD4Q6ZMP0 1018 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 H1FOOQ8IZA3 346 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 MUC15Q8N387 334 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SPPL3Q8TCT6 385 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RDH5Q92781 318 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 OR2V2Q96R30 315 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SPSB2Q99619 263 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 CLDND1Q9NY35 253 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 B3GAT1Q9P2W7 334 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SIRT4Q9Y6E7 314 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 HEATR5BQ9P2D3 2071 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 SHISA3A0PJX4 238 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 ANKRD34CP0C6C1 535 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RCC1P18754 421 aaPredicted RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 KLK2P20151 261 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 LIMS1P48059 325 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 RPS16P62249 146 aaKnown RBP8.16□□□□□ -1.1
SMC6-207ENST00000448223 SLC48A1Q6P1K1 146 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 UBALD1Q8TB05 177 aa8.16□□□□□ -1.1
SMC6-207ENST00000448223 PIMREGQ9BSJ6 248 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms