RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 ZDHHC21Q8IVQ6 265 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 ANAPC16Q96DE5 110 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 FAM210AQ96ND0 272 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 RNF5Q99942 180 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 CYB5R1Q9UHQ9 305 aa4.42□□□□□ -1.7
BRAFP1-201ENST00000445336 TRAV3A0A0B4J244 114 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 FAM223BA6NKX1 122 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 CCDC22O60826 627 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 IGHV3-11P01762 117 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 BCHEP06276 602 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 SPP1P10451 314 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 EMX2Q04743 252 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 LAMTOR1Q6IAA8 161 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 LIN54Q6MZP7 749 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 C8orf82Q6P1X6 216 aaPredicted RBP4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 RPS27LQ71UM5 84 aaKnown RBP4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 FAM223AQ8IWN6 122 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 ZNF114Q8NC26 417 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 TSPEARQ8WU66 669 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 HPSE2Q8WWQ2 592 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 OR10A2Q9H208 303 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 SDHDO14521 159 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 NBR2O15453 112 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 E2F6O75461 281 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 NXPH2O95156 264 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 SPART-AS1P0CW21 52 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 KRT71Q3SY84 523 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 C3orf62Q6ZUJ4 267 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 TRAPPC6BQ86SZ2 158 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 ASCC1Q8N9N2 400 aaKnown RBP4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 TMEM120AQ9BXJ8 343 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 RHOFQ9HBH0 211 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 CENPMQ9NSP4 180 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 MRPL27Q9P0M9 148 aaKnown RBP4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 RIMS3Q9UJD0 308 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 ZNF180Q9UJW8 692 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 GMEB1Q9Y692 573 aa4.41□□□□□ -1.7
BRAFP1-201ENST00000445336 KBTBD11-OT1A0A1B0GTJ5 212 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 FAM172BPA6NC97 362 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 CCDC154A6NI56 674 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 LANCL1O43813 399 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 SERPINB7O75635 380 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 MMP23AO75900 390 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 REG1AP05451 166 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 CBLN1P23435 193 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 TFPI2P48307 235 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 IL24Q13007 206 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 CEP78Q5JTW2 689 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 RBPMS2Q6ZRY4 209 aaKnown RBP4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 PPP1R27Q86WC6 154 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 CCDC63Q8NA47 563 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 BBS1Q8NFJ9 593 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 OR1L1Q8NH94 360 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 REEP6Q96HR9 211 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 MCHR1Q99705 422 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 RHBDD3Q9Y3P4 386 aa4.4□□□□□ -1.7
BRAFP1-201ENST00000445336 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 SMIM9A6NGZ8 99 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 KDM4BO94953 1096 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 TXNDC12O95881 172 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 MYOD1P15172 320 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 PIN1Q13526 163 aaPredicted RBP4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 PGS1Q32NB8 556 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 ZNF585BQ52M93 769 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 TMEM139Q8IV31 216 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 OR10X1Q8NGY0 326 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 RTN4IP1Q8WWV3 396 aaPredicted RBP4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 GPX7Q96SL4 187 aaPredicted RBP4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 NAPGQ99747 312 aaPredicted RBP4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 THAP1Q9NVV9 213 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 IDI2-AS1Q9NZ38 188 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 TFR2Q9UP52 801 aa4.4□□□□□ -1.71
BRAFP1-201ENST00000445336 ELOA3CA0A087WX78 387 aaPredicted RBP4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 A0A1B0GW64 132 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ACOD1A6NK06 481 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 RBBP9O75884 186 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 DFFBO76075 338 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 TFF1P04155 84 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 CD14P08571 375 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 CGB3P0DN86 165 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 CGB7P0DN87 165 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ZNF20P17024 532 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 SSTR1P30872 391 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 RPL37AP61513 92 aaKnown RBP4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 GRK1Q15835 563 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 MROH9Q5TGP6 573 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 TIFABQ6ZNK6 161 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ODF3L1Q8IXM7 274 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 TIGD4Q8IY51 512 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ACMSDQ8TDX5 336 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 CADM1Q9BY67 442 aaKnown RBP4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ROPN1Q9HAT0 212 aaPredicted RBP4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 RAB9BQ9NP90 201 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 DCAF13Q9NV06 445 aaKnown RBP4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 GRHPRQ9UBQ7 328 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 ZNF221Q9UK13 617 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 C5orf58C9J3I9 102 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 SERPINB5P36952 375 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 SLC15A1P46059 708 aa4.39□□□□□ -1.71
BRAFP1-201ENST00000445336 IDH3AP50213 366 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms