RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	OR4F17	Q8NGA8	305 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	PTPMT1	Q8WUK0	201 aa	Predicted RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	OR4F4	Q96R69	305 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SMG9	Q9H0W8	520 aa	Known RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	NXF5	Q9H1B4	397 aa	Known RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SLC25A18	Q9H1K4	315 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	MED29	Q9NX70	200 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	FLRT3	Q9NZU0	649 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SH2B3	Q9UQQ2	575 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	VWA8	A3KMH1	1905 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ATG2A	Q2TAZ0	1938 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	KIAA1671	Q9BY89	1806 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SMIM9	A6NGZ8	99 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	C1QTNF9B	B2RNN3	333 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329		M0QYG6	137 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SH2D1B	O14796	132 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	XRCC2	O43543	280 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	NUDT3	O95989	172 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SRF	P11831	508 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	HOXB9	P17482	250 aa	Predicted RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	USF1	P22415	310 aa	Predicted RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	TIA1	P31483	386 aa	Known RBP eCLIP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SRP14	P37108	136 aa	Known RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	LSS	P48449	732 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SIRPA	P78324	504 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	CYCS	P99999	105 aa	Known RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	PLP2	Q04941	152 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	EIF2B1	Q14232	305 aa	Known RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	PCK2	Q16822	640 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	EMC4	Q5J8M3	183 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	SLC25A30	Q5SVS4	291 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	LCN15	Q6UWW0	184 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ATOH7	Q8N100	152 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	CLDN19	Q8N6F1	224 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ZNF689	Q96CS4	500 aa	Predicted RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	PCED1B	Q96HM7	432 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ADO	Q96SZ5	270 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	KCNK17	Q96T54	332 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	HCAR1	Q9BXC0	346 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	WNT10A	Q9GZT5	417 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	LRTM1	Q9HBL6	345 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	CISH	Q9NSE2	258 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	FBXL7	Q9UJT9	491 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	TIMM13	Q9Y5L4	95 aa	Predicted RBP	5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	C5orf42	Q9H799	3197 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	GON4L	Q3T8J9	2241 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	FAM231B	A6NCW3	169 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ANKRD30BL	A7E2S9	258 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329		J3QR89	54 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	CTSE	P14091	401 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	HMGA2	P52926	109 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	CCL20	P78556	96 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	RAB32	Q13637	225 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ADIRF	Q15847	76 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	TMEM42	Q69YG0	159 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	HMGN2P46	Q86SG4	172 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	OR2I1P	Q8NGU4	316 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	AQP3	Q92482	292 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	GPER1	Q99527	375 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	ATP5S	Q99766	215 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	NMES1	Q9C002	83 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	NIF3L1	Q9GZT8	377 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	NECAP2	Q9NVZ3	263 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	PLA2G3	Q9NZ20	509 aa		5.91	□□□□□ -1.46
TRIM6-205	ENST00000445329	GRIFIN	A4D1Z8	144 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	EIF1AY	O14602	144 aa	Known RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	P2RX6	O15547	441 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	ABHD16A	O95870	558 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	CYB5A	P00167	134 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	PPIB	P23284	216 aa	Known RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	LMO2	P25791	158 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	GALR1	P47211	349 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	EIF1AX	P47813	144 aa	Known RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	RRAD	P55042	308 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	PNRC1	Q12796	327 aa	Predicted RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	SGCB	Q16585	318 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	PRICKLE4	Q2TBC4	344 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	BVES-AS1	Q5T3Y7	98 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	OPN5	Q6U736	354 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	LRRC69	Q6ZNQ3	347 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	C16orf82	Q7Z2V1	217 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	ZNF761	Q86XN6	746 aa	Predicted RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	TP53INP2	Q8IXH6	220 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	YAF2	Q8IY57	180 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	DOCK8	Q8NF50	2099 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	OR8B12	Q8NGG6	310 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	STAG3L4	Q8TBR4	150 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	NRGN	Q92686	78 aa		5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	RCL1	Q9Y2P8	373 aa	Known RBP	5.9	□□□□□ -1.46
TRIM6-205	ENST00000445329	TRAV1-2	A0A0B4J238	106 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	NPEPPSL1	A6NEC2	478 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	P2RY10	O00398	339 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	DEGS1	O15121	323 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	CLEC3A	O75596	197 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	AGFG2	O95081	481 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	HRAS	P01112	189 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	KRAS	P01116	189 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	PFN1	P07737	140 aa	Known RBP	5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	LINC00271	P0C7V0	271 aa		5.9	□□□□□ -1.47
TRIM6-205	ENST00000445329	B4GALT1	P15291	398 aa		5.9	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms