RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 SCAND1P57086 179 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 LCN2P80188 198 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 CNPY1Q3B7I2 92 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 CYB5R2Q6BCY4 276 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 ZNF841Q6ZN19 808 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 GDPD3Q7L5L3 318 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 C6orf201Q7Z4U5 140 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 IZUMO1Q8IYV9 350 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 OR4M1Q8NGD0 313 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 DYRK2Q92630 601 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 SSBP3Q9BWW4 388 aaPredicted RBP14.27□□□□□ -0.13
LIME1-202ENST00000444951 PLEKHJ1Q9NW61 149 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 TMEM160Q9NX00 188 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 MEX3AA1L020 520 aaKnown RBP14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A10PA6NDY2 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A18PA6NE21 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A16PA6NEW6 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A20PA6NIJ5 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A8PA6NJQ4 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A7PA6NKC0 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A22PA8MWA6 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A12PA8MX19 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A5PA8MXJ8 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A23PA8MXZ1 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 MCRIP1C9JLW8 97 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 K7N7A8 449 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A15PP0C7V4 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A13PP0C7W8 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A14PP0C7W9 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM90A24PP0C7X0 464 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 ELK1P19419 428 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 LMO1P25800 156 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 CHATP28329 748 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 EDDM3BP56851 147 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM189A2Q15884 450 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 WDR25Q64LD2 544 aaPredicted RBP14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAM89BQ8N5H3 189 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 TPRX1Q8N7U7 411 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 OR10R2Q8NGX6 335 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 PPP1R35Q8TAP8 253 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 RAB3CQ96E17 227 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 ARHGAP5-AS1Q96IT6 56 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 FAAP24Q9BTP7 215 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 SHARPINQ9H0F6 387 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 ZMAT3Q9HA38 289 aaKnown RBP14.26□□□□□ -0.13
LIME1-202ENST00000444951 SEBOXQ9HB31 216 aaPredicted RBP14.26□□□□□ -0.13
LIME1-202ENST00000444951 SPACA1Q9HBV2 294 aa14.26□□□□□ -0.13
LIME1-202ENST00000444951 GNB3P16520 340 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 ZFP36P26651 326 aaKnown RBP14.25□□□□□ -0.13
LIME1-202ENST00000444951 AESQ08117 197 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 DYNC1I2Q13409 638 aaKnown RBP14.25□□□□□ -0.13
LIME1-202ENST00000444951 KRTAP24-1Q3LI83 254 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 Q6ZTK2 550 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 BTN2A1Q7KYR7 527 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 LAX1Q8IWV1 398 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 OR8H2Q8N162 312 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 OR5D13Q8NGL4 314 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 TMEM158Q8WZ71 300 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 MSI2Q96DH6 328 aaKnown RBP14.25□□□□□ -0.13
LIME1-202ENST00000444951 S100A16Q96FQ6 103 aaKnown RBP14.25□□□□□ -0.13
LIME1-202ENST00000444951 SULT4A1Q9BR01 284 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 BEX2Q9BXY8 128 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 PECRQ9BY49 303 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 IFT22Q9H7X7 185 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 DIABLOQ9NR28 239 aa14.25□□□□□ -0.13
LIME1-202ENST00000444951 TRAV18A0A075B6X5 111 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 RAB27BO00194 218 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 MGST3O14880 152 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 CDK2P24941 298 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 TMEM50BP56557 158 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 RBM39Q14498 530 aaKnown RBP14.24□□□□□ -0.13
LIME1-202ENST00000444951 PLAC9Q5JTB6 97 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 OLFML2AQ68BL7 652 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 FAM185AQ8N0U4 392 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 PLPPR1Q8TBJ4 325 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 RAB40AQ8WXH6 277 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 FAM234AQ9H0X4 552 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 ABCG5Q9H222 651 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 MIXL1Q9H2W2 232 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 ETAA1Q9NY74 926 aa14.24□□□□□ -0.13
LIME1-202ENST00000444951 RCC2Q9P258 522 aaKnown RBP14.24□□□□□ -0.13
LIME1-202ENST00000444951 LOC105371242A0A075B767 164 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 FOXI3A8MTJ6 420 aaPredicted RBP14.23□□□□□ -0.13
LIME1-202ENST00000444951 H3BUI4 141 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 APOA1P02647 267 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 GLIPR1P48060 266 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 GZMKP49863 264 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 NPY4RP50391 375 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 CDNFQ49AH0 187 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 KRBOX4Q5JUW0 171 aa14.23□□□□□ -0.13
LIME1-202ENST00000444951 NXF2Q9GZY0 626 aaKnown RBP14.23□□□□□ -0.13
LIME1-202ENST00000444951 MRPS7Q9Y2R9 242 aaKnown RBP14.23□□□□□ -0.13
LIME1-202ENST00000444951 TRAV39A0A0B4J263 110 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 A0A1W2PQ09 198 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 C22orf46C9J442 243 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 FOXH1O75593 365 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 SCGNO76038 276 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 HIST1H1DP16402 221 aaKnown RBP14.22□□□□□ -0.13
LIME1-202ENST00000444951 TMEM69Q5SWH9 247 aa14.22□□□□□ -0.13
LIME1-202ENST00000444951 FAM120AOSQ5T036 256 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms