RNA–Protein interactions for RNA: ENST00000443891.5

CTDSP1-204, Transcript of CTD small phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDSP1, Length 1,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-204ENST00000443891 Q8NFD4 153 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 OR5D18Q8NGL1 313 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 RHOXF1Q8NHV9 184 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 SPACA5Q96QH8 159 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
CTDSP1-204ENST00000443891 NOTCH3Q9UM47 2321 aa13.02□□□□□ -0.32
CTDSP1-204ENST00000443891 TCRBV4S1A1TA0A5B7 111 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A18PA6NE21 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A16PA6NEW6 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A20PA6NIJ5 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A9PA6NNJ1 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A12PA8MX19 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A5PA8MXJ8 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 ZFPL1O95159 310 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A15PP0C7V4 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A13PP0C7W8 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A14PP0C7W9 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 FAM90A24PP0C7X0 464 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 RAB3AP20336 220 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 SLC35A2P78381 396 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 ABCA11PQ4W5N1 156 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 KLHL22Q53GT1 634 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 ZNF529Q6P280 563 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 RCC1LQ96I51 464 aaKnown RBP13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 KIRREL1Q96J84 757 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 C9orf16Q9BUW7 83 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 GPR61Q9BZJ8 451 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 ERVK13-1Q9NX77 482 aa13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 RPL36Q9Y3U8 105 aaKnown RBP13.02□□□□□ -0.33
CTDSP1-204ENST00000443891 H0YJX3 145 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 H3BNX3 289 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 PF4P02776 101 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 CD2P06729 351 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 SLC6A1P30531 599 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 GDNFP39905 211 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 ATXN7L3Q14CW9 347 aaPredicted RBP13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 TMEM95Q3KNT9 176 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 ZIK1Q3SY52 487 aaPredicted RBP13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 CCDC58Q4VC31 144 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 PAN3Q58A45 887 aaKnown RBP13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 BAIAP2L2Q6UXY1 529 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 ASCL4Q6XD76 172 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 CBR4Q8N4T8 237 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 CNIH3Q8TBE1 160 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 RPEQ96AT9 228 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 ZNF649Q9BS31 505 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 JAM3Q9BX67 310 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 AURKAIP1Q9NWT8 199 aaPredicted RBP13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 MOB4Q9Y3A3 225 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 HSPE1-MOB4S4R3N1 261 aa13.01□□□□□ -0.33
CTDSP1-204ENST00000443891 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 J3QR06 171 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 FGF16O43320 207 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 BAG2O95816 211 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 IL1AP01583 271 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 AMY1AP04745 511 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 AMY2AP04746 511 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 LPLP06858 475 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 OR3A4PP47883 348 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 RAB7AP51149 207 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 FOXB2Q5VYV0 432 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 LPCAT4Q643R3 524 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 RNF144BQ7Z419 303 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 OR8H3Q8N146 312 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 OSR2Q8N2R0 312 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 TSEN15Q8WW01 171 aaKnown RBP13□□□□□ -0.33
CTDSP1-204ENST00000443891 MYDGFQ969H8 173 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 TOMM40LQ969M1 308 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 IFT22Q9H7X7 185 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 ISG20L2Q9H9L3 353 aaKnown RBP13□□□□□ -0.33
CTDSP1-204ENST00000443891 CALYQ9NYX4 217 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 IDI2-AS1Q9NZ38 188 aa13□□□□□ -0.33
CTDSP1-204ENST00000443891 MEIKINA0A087WXM9 373 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 TRAV24A0A0B4J272 114 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 PRB2P02812 416 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 GZMHP20718 246 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 CD24P25063 80 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 NFYBP25208 207 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 GLP1RP43220 463 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 MADCAM1Q13477 382 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 TCTEX1D4Q5JR98 221 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 RPL22L1Q6P5R6 122 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 LINC00596Q86U02 117 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 GPR148Q8TDV2 347 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 GPER1Q99527 375 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 PPIL3Q9H2H8 161 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 PAK1IP1Q9NWT1 392 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 IL36GQ9NZH8 169 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 KIF25Q9UIL4 384 aa12.99□□□□□ -0.33
CTDSP1-204ENST00000443891 LOC100130705A0A1B0GUX0 176 aa12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 A0A1W2PRX2 142 aa12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 ZNF780AO75290 641 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 RBM39Q14498 530 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 RSU1Q15404 277 aa12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 RSBN1Q5VWQ0 802 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-204ENST00000443891 COMMD1Q8N668 190 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms