RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PCED1AQ9H1Q7 454 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PEBP1P30086 187 aaKnown RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 ACTL10Q5JWF8 245 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PRR18Q8N4B5 295 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 TMEM252Q8N6L7 170 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 BAHD1Q8TBE0 780 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 ANAPC16Q96DE5 110 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PLK3Q9H4B4 646 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 SLC35D1Q9NTN3 355 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 POLR3KQ9Y2Y1 108 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 ZNF236Q9UL36 1845 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CDS2O95674 445 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 PPP1CBP62140 327 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CXorf66Q5JRM2 361 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 RTN4RL2Q86UN3 420 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 SLC24A4Q8NFF2 622 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ELSPBP1Q96BH3 223 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 FAAP24Q9BTP7 215 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 COL4A5P29400 1685 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CLDN1O95832 211 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 TMEM267Q0VDI3 215 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 TCTN1Q2MV58 587 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 LANCL2Q9NS86 450 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 RBM7Q9Y580 266 aaKnown RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 DBHP09172 617 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 NSDHLQ15738 373 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 FAM78AQ5JUQ0 283 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ASPHD2Q6ICH7 369 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 MOB3AQ96BX8 217 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 RUNX1Q01196 453 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CST6Q15828 149 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ATP6V1FQ16864 119 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OR2V1Q8NHB1 315 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 SPTSSAQ969W0 71 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 STARD4Q96DR4 205 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 MOB1AQ9H8S9 216 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 FAM53BQ14153 422 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 DGAT2L6Q6ZPD8 337 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 C20orf196Q8IYI0 205 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 RNF2Q99496 336 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ANAPC10Q9UM13 185 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 COL5A3P25940 1745 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 RNF212BA8MTL3 300 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 K7EQS6 105 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 CNOT4O95628 575 aaKnown RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 UBE2V1Q13404 147 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OR56B2PQ8NGI1 322 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 DDIT4LQ96D03 193 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 ANKRD36A6QL64 1941 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 TET1Q8NFU7 2136 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 NXPH3O95157 252 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 MYPOPQ86VE0 399 aaPredicted RBP4.39□□□□□ -1.71
HERC1-201ENST00000443617 ZNF665Q9H7R5 613 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 RLFQ13129 1914 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 TNFRSF10CO14798 259 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 OPN1LWP04000 364 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 NUDT22Q9BRQ3 303 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 SDF2L1Q9HCN8 221 aa4.39□□□□□ -1.71
HERC1-201ENST00000443617 A0A0A6YYD4 124 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 BPIFB3P59826 476 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CBLN3Q6UW01 205 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 VN1R17PQ8TDU5 208 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MCTS1Q9ULC4 181 aaKnown RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 GYPAP02724 150 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MSR1P21757 451 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 S100A7P31151 101 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TFPI2P48307 235 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 VSTM2BA6NLU5 285 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SEMA4FO95754 770 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MDH2P40926 338 aaKnown RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 AGMATQ9BSE5 352 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 GLRX2Q9NS18 164 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 C3orf85A0A1B0GTC6 90 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 C11orf94C9JXX5 98 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 F6UZH7 168 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ATXN7O15265 892 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 CIDEAO60543 219 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 BRS3P32247 399 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 GNB2P62879 340 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 PSG6Q00889 435 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 FFAR4Q5NUL3 377 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 SPSB3Q6PJ21 355 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 APOOQ9BUR5 198 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ZNF814B7Z6K7 855 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 OR4A47Q6IF82 309 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 PRSS41Q7RTY9 318 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 ZNF519Q8TB69 540 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 DOCK1Q14185 1865 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 PRSS38A1L453 326 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 IFI6P09912 130 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 WNT5AP41221 380 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MEF2BQ02080 365 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 OR10S1Q8NGN2 331 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 MMABQ96EY8 250 aaPredicted RBP4.38□□□□□ -1.71
HERC1-201ENST00000443617 FAM166BA8MTA8 275 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TMEM250H0YL14 139 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 KBTBD11O94819 623 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 FAHP16930 419 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 TMEM11P17152 192 aa4.38□□□□□ -1.71
HERC1-201ENST00000443617 CCR2P41597 374 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms