RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 MDC1Q14676 2089 aaKnown RBP19.59■□□□□ 0.73
CTDSPL-206ENST00000443503 SIGIRRQ6IA17 410 aa19.58■□□□□ 0.73
CTDSPL-206ENST00000443503 OR5A2Q8NGI9 324 aa19.58■□□□□ 0.73
CTDSPL-206ENST00000443503 A0A1W2PPQ1 181 aa19.58■□□□□ 0.73
CTDSPL-206ENST00000443503 C9orf152Q5JTZ5 239 aa19.58■□□□□ 0.73
CTDSPL-206ENST00000443503 LEUTXA8MZ59 168 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 MPV17LQ2QL34 196 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 LRRC10Q5BKY1 277 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 SPINK9Q5DT21 86 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 OR13D1Q8NGV5 346 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 ACY3Q96HD9 319 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 LRRC37A2A6NM11 1700 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 TMEM211Q6ICI0 200 aa19.58■□□□□ 0.72
CTDSPL-206ENST00000443503 DVL1P1P54792 670 aaPredicted RBP19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 TEX30Q5JUR7 227 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 STUMQ69YW2 141 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 SLC25A40Q8TBP6 338 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 SOX15O60248 233 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 C1orf100Q5SVJ3 147 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 HSD17B13Q7Z5P4 300 aaPredicted RBP19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 APCDD1LQ8NCL9 501 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 POM121L2Q96KW2 1035 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 KIAA1456Q9P272 454 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 TMEM11P17152 192 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 MDP1Q86V88 176 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF488Q96MN9 340 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 SLC26A1Q9H2B4 701 aa19.57■□□□□ 0.72
CTDSPL-206ENST00000443503 ADH4P08319 380 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF90Q03938 601 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 LINC00052Q96N35 136 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 CACFD1Q9UGQ2 172 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 MTCL1Q9Y4B5 1905 aaKnown RBP19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 SKA3Q8IX90 412 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF439Q8NDP4 499 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 AKIRIN1Q9H9L7 192 aaPredicted RBP19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 MSL2Q9HCI7 577 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 RAB13P51153 203 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 SDHCQ99643 169 aaPredicted RBP19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 OR51I2Q9H344 312 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 ADAM11O75078 769 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 HRASP01112 189 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 ISG15P05161 165 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 PCOLCEQ15113 449 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 IGFBP7Q16270 282 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF260Q3ZCT1 412 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 OR2J1Q9GZK6 312 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 CHRNA10Q9GZZ6 450 aa19.56■□□□□ 0.72
CTDSPL-206ENST00000443503 DEFA6Q01524 100 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 GPR137Q96N19 417 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF426Q9BUY5 554 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 CHST1O43916 411 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 FABP1P07148 127 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 TGIF1Q15583 401 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF429Q86V71 674 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNRF4Q8WWF5 429 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 MMP24Q9Y5R2 645 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 B3GALNT1O75752 331 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 TLE1Q04724 770 aa19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF331Q9NQX6 463 aaPredicted RBP19.55■□□□□ 0.72
CTDSPL-206ENST00000443503 SYNGR2O43760 224 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 BTNL3Q6UXE8 466 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 HAND1O96004 215 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 FFAR4Q5NUL3 377 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 BSCL2Q96G97 398 aaPredicted RBP19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 ELF5Q9UKW6 265 aaPredicted RBP19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 MAP1LC3B2A6NCE7 125 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 LYPD8Q6UX82 237 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 ETV3LQ6ZN32 361 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF561Q8N587 486 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 MS4A3Q96HJ5 214 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 MAP1LC3BQ9GZQ8 125 aa19.54■□□□□ 0.72
CTDSPL-206ENST00000443503 COX6A1P12074 109 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 MOB3BQ86TA1 216 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 SAT2Q96F10 170 aaPredicted RBP19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 FAM206AQ9NX38 181 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 A0A1W2PNV4 684 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 RECKO95980 971 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 PMELP40967 661 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 RBM11P57052 281 aaKnown RBP19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 C19orf48Q6RUI8 117 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 BHLHA15Q7RTS1 189 aaPredicted RBP19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 SLC35B3Q9H1N7 401 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 V9GYS6 101 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 RALGAPA1Q6GYQ0 2036 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 IGKV3D-11A0A0A0MRZ8 115 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 FAM90A27PA6NNH2 459 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 K7EQM0 130 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 IGLV3-19P01714 112 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 FOXO1Q12778 655 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 NKX2-6A6NCS4 301 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 ZNF528Q3MIS6 628 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 TREM2Q9NZC2 230 aa19.53■□□□□ 0.72
CTDSPL-206ENST00000443503 INTS1Q8N201 2190 aaKnown RBP19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 HOXD11P31277 338 aaPredicted RBP19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 TRAT1Q6PIZ9 186 aa19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 BVESQ8NE79 360 aa19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 TMEM229AB2RXF0 380 aa19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 OPN1MWP04001 364 aa19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 OPN1MW2P0DN77 364 aa19.52■□□□□ 0.72
CTDSPL-206ENST00000443503 OPN1MW3P0DN78 364 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms