RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 HIST1H2BJP06899 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BOP23527 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 S100A2P29034 98 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BBP33778 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 CDX1P47902 265 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BDP58876 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BCP62807 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 TNFRSF9Q07011 255 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST2H2BEQ16778 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 CXorf66Q5JRM2 361 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-218ENST00000442625 Q5PR19 223 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.22□□□□□ -0.45
MCF2L-218ENST00000442625 VHLLQ6RSH7 139 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 OR5L2Q8NGL0 311 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BHQ93079 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 C18orf12Q96KH6 178 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BNQ99877 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 HIST1H2BMQ99879 126 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 SIRT7Q9NRC8 400 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 NECAP2Q9NVZ3 263 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 PLEK2Q9NYT0 353 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 A0A1W2PN81 502 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 STAG3L3P0CL85 134 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 SPINK2P20155 84 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 DUSP1P28562 367 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 CHRNA7P36544 502 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
MCF2L-218ENST00000442625 SOX8P57073 446 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 TLE1Q04724 770 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 SLC16A14Q7RTX9 510 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 RNF138Q8WVD3 245 aa12.22□□□□□ -0.45
MCF2L-218ENST00000442625 GAR1Q9NY12 217 aaKnown RBP12.22□□□□□ -0.45
MCF2L-218ENST00000442625 IGLV3-12A0A075B6K2 115 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 M0R135 149 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 RBX1P62877 108 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 HTD2P86397 168 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 GAMTQ14353 236 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 ZNF429Q86V71 674 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 GJC3Q8NFK1 279 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 SPACA9Q96E40 222 aaPredicted RBP12.21□□□□□ -0.45
MCF2L-218ENST00000442625 ZNF799Q96GE5 643 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 BOD1Q96IK1 185 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 HSF4Q9ULV5 492 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 V9GYS6 101 aa12.21□□□□□ -0.45
MCF2L-218ENST00000442625 IGKV1-12A0A0C4DH73 117 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 TLX3O43711 291 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-218ENST00000442625 IGKV1D-12P01611 117 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 IGLV3-1P01715 115 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 AADACP22760 399 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.46
MCF2L-218ENST00000442625 ADPRHL1Q8NDY3 354 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 OR10AD1Q8NGE0 317 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 R3HDM4Q96D70 268 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 CCDC74BQ96LY2 380 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 DEFB126Q9BYW3 111 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 PRDM13Q9H4Q3 707 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 SEMA5BQ9P283 1151 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 IL19Q9UHD0 177 aa12.21□□□□□ -0.46
MCF2L-218ENST00000442625 ALDH3B1P43353 468 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 WDR74Q6RFH5 385 aaPredicted RBP12.2□□□□□ -0.46
MCF2L-218ENST00000442625 FBXL14Q8N1E6 418 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 OR2C3Q8N628 320 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 ZNF610Q8N9Z0 462 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 NAT6Q93015 286 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 NABP1Q96AH0 204 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 SMOC1Q9H4F8 434 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 P4HTMQ9NXG6 502 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 STRAPQ9Y3F4 350 aaKnown RBP12.2□□□□□ -0.46
MCF2L-218ENST00000442625 SRP19P09132 144 aaKnown RBP12.2□□□□□ -0.46
MCF2L-218ENST00000442625 FABP4P15090 132 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 KHDC3LQ587J8 217 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 GPR157Q5UAW9 335 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 TMEM123Q8N131 208 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 OR5C1Q8NGR4 320 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 PP6455Q8WZ26 134 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 DECR2Q9NUI1 292 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 FAM86C1Q9NVL1 165 aa12.2□□□□□ -0.46
MCF2L-218ENST00000442625 ARHGAP21Q5T5U3 1957 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 IGLV3-32A0A0A0MS00 114 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 TMEM238C9JI98 176 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 H3BP45 60 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 TMEM50AO95807 157 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 GNMTQ14749 295 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 ICAM4Q14773 271 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 HIKESHIQ53FT3 197 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 RAET1LQ5VY80 246 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 FAM180AQ6UWF9 173 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 SMIM15Q7Z3B0 74 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-218ENST00000442625 CHCHD2Q9Y6H1 151 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-218ENST00000442625 PROB1E7EW31 1015 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 C3orf80F5H4A9 247 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 ZNF25P17030 456 aaPredicted RBP12.19□□□□□ -0.46
MCF2L-218ENST00000442625 DYNLT3P51808 116 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 LSM6P62312 80 aaKnown RBP12.19□□□□□ -0.46
MCF2L-218ENST00000442625 RAB1AP62820 205 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 SPIN3Q5JUX0 258 aa12.19□□□□□ -0.46
MCF2L-218ENST00000442625 GUSBP11Q6P575 273 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 289.4 ms