RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 PARP16Q8N5Y8 322 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 OR5AU1Q8NGC0 362 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 OR51D1Q8NGF3 324 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 OR9G1Q8NH87 305 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 GPR148Q8TDV2 347 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 SGCDQ92629 289 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 THRSPQ92748 146 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 DPF1Q92782 380 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RPEQ96AT9 228 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 PELI1Q96FA3 418 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RBM14Q96PK6 669 aaKnown RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 GON7Q9BXV9 100 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 WNT10AQ9GZT5 417 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 METTL9Q9H1A3 318 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 MRPS18AQ9NVS2 196 aaKnown RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 NECAP2Q9NVZ3 263 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 A0A087X0M5 115 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 IGKV1-9A0A0C4DH69 117 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 KBTBD11-OT1A0A1B0GTJ5 212 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 LOC100130705A0A1B0GUX0 176 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 A0A1B0GX30 115 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 TCRBV4S1A1TA0A5B7 111 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 F8VVB4 439 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 F8VWA3 439 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 BUB1B-PAK6H3BSN5 160 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 EI24O14681 340 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 CHST1O43916 411 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 PSPNO60542 156 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 PF4P02776 101 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 MYL12AP19105 171 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 IL3RAP26951 378 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 DUSP1P28562 367 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RANBP1P43487 201 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RAB13P51153 203 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 LOXL3P58215 753 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 SLC35B1P78383 322 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 AESQ08117 197 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 BEAN1Q3B7T3 259 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 TMEM30BQ3MIR4 351 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 ZIK1Q3SY52 487 aaPredicted RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 TPTE2P1Q5T6R2 138 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RPL22L1Q6P5R6 122 aaKnown RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 LHFPL3Q86UP9 236 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 SATL1Q86VE3 508 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 OR8H3Q8N146 312 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 STX19Q8N4C7 294 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 COMMD1Q8N668 190 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 C11orf44Q8N8P7 122 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 OR13C9Q8NGT0 318 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 RHOXF1Q8NHV9 184 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 PYDC1Q8WXC3 89 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 LGALS12Q96DT0 336 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 SLC25A33Q9BSK2 321 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 MCRIP2Q9BUT9 160 aaKnown RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 SSBP4Q9BWG4 385 aaPredicted RBP6.25□□□□□ -1.41
CD44-211ENST00000442151 IDI2-AS1Q9NZ38 188 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 CKLFQ9UBR5 152 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 MYRFQ9Y2G1 1151 aa6.25□□□□□ -1.41
CD44-211ENST00000442151 CD28P10747 220 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 DCKP27707 260 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 SNU13P55769 128 aaKnown RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 SLC35A2P78381 396 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 MADCAM1Q13477 382 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 RBM39Q14498 530 aaKnown RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 HLA-DRB5Q30154 266 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 PAN3Q58A45 887 aaKnown RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 CCBE1Q6UXH8 406 aaPredicted RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 TMEM219Q86XT9 240 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 CBR4Q8N4T8 237 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 OR4P4Q8NGL7 312 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 TNFAIP8L1Q8WVP5 186 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 CITED2Q99967 270 aaPredicted RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 MMP28Q9H239 520 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 SPACA1Q9HBV2 294 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 ZFP57Q9NU63 452 aa6.24□□□□□ -1.41
CD44-211ENST00000442151 EXOSC1Q9Y3B2 195 aaKnown RBP6.24□□□□□ -1.41
CD44-211ENST00000442151 ELOA3CA0A087WX78 387 aaPredicted RBP6.23□□□□□ -1.41
CD44-211ENST00000442151 MEIKINA0A087WXM9 373 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 ERICH4A6NGS2 130 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 H0YJX3 145 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 SLC33A1O00400 549 aaPredicted RBP6.23□□□□□ -1.41
CD44-211ENST00000442151 EBAG9O00559 213 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 IGLV1-47P01700 117 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 GAPDHP04406 335 aaKnown RBP6.23□□□□□ -1.41
CD44-211ENST00000442151 NFYBP25208 207 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 GLIPR1P48060 266 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 NANOS3P60323 173 aaKnown RBP6.23□□□□□ -1.41
CD44-211ENST00000442151 BLCAPP62952 87 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 CD83Q01151 205 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 PAX5Q02548 391 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 MPV17LQ2QL34 196 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 Q3ZCU0 254 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 PRAMEF5Q5TYX0 476 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 TTC23Q5W5X9 447 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 Q6P435 159 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 TRAT1Q6PIZ9 186 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 CDH26Q8IXH8 852 aa6.23□□□□□ -1.41
CD44-211ENST00000442151 DYNAPQ8N1N2 210 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms