RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 DOPEY1Q5JWR5 2465 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 OVCH2Q7RTZ1 564 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 TMED4Q7Z7H5 227 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 MUC15Q8N387 334 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 HPS1Q92902 700 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 GHITMQ9H3K2 345 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 SAP30LQ9HAJ7 183 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 TMEM165Q9HC07 324 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 WIPI2Q9Y4P8 454 aa16.02■□□□□ 0.16
SNX17-203ENST00000440760 DSCAMO60469 2012 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 IGKV1D-17A0A075B6S4 117 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 TMEM82A0PJX8 343 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 C7orf66A4D0T2 115 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 LHBP01229 141 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 HPXP02790 462 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 GSTT2P0CG29 244 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 PSG2P11465 335 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 RAG2P55895 527 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 ATPAF1Q5TC12 328 aaPredicted RBP16.02■□□□□ 0.15
SNX17-203ENST00000440760 ARRDC1Q8N5I2 433 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 OR52B4Q8NGK2 314 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 CCDC107Q8WV48 283 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 CAPSLQ8WWF8 208 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 Q9N2K0 584 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 RNF7Q9UBF6 113 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 COL12A1Q99715 3063 aa16.02■□□□□ 0.15
SNX17-203ENST00000440760 B9A039 149 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 RCC1P18754 421 aaPredicted RBP16.01■□□□□ 0.15
SNX17-203ENST00000440760 NPY4RP50391 375 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 ASCC1Q8N9N2 400 aaKnown RBP16.01■□□□□ 0.15
SNX17-203ENST00000440760 MARCH1Q8TCQ1 289 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 DIRC2Q96SL1 478 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 SLC25A21Q9BQT8 299 aaPredicted RBP16.01■□□□□ 0.15
SNX17-203ENST00000440760 TMPRSS13Q9BYE2 586 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 LIME1Q9H400 295 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 DECR2Q9NUI1 292 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 GLS2Q9UI32 602 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 NPTNQ9Y639 398 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 SPTAN1Q13813 2472 aaKnown RBP16.01■□□□□ 0.15
SNX17-203ENST00000440760 KIAA2026Q5HYC2 2103 aa16.01■□□□□ 0.15
SNX17-203ENST00000440760 A0A1W2PPR1 153 aa16■□□□□ 0.15
SNX17-203ENST00000440760 H3BUI4 141 aa16■□□□□ 0.15
SNX17-203ENST00000440760 EIF2B2P49770 351 aaKnown RBP16■□□□□ 0.15
SNX17-203ENST00000440760 BAMBIQ13145 260 aa16■□□□□ 0.15
SNX17-203ENST00000440760 ZMYND11Q15326 602 aa16■□□□□ 0.15
SNX17-203ENST00000440760 TESK1Q15569 626 aa16■□□□□ 0.15
SNX17-203ENST00000440760 IGSF11Q5DX21 431 aa16■□□□□ 0.15
SNX17-203ENST00000440760 AKAP14Q86UN6 197 aa16■□□□□ 0.15
SNX17-203ENST00000440760 RASL12Q9NYN1 266 aa16■□□□□ 0.15
SNX17-203ENST00000440760 TANC2Q9HCD6 1990 aa16■□□□□ 0.15
SNX17-203ENST00000440760 GLAP06280 429 aa16■□□□□ 0.15
SNX17-203ENST00000440760 SCTP09683 121 aa16■□□□□ 0.15
SNX17-203ENST00000440760 OR5H8P0DN80 308 aa16■□□□□ 0.15
SNX17-203ENST00000440760 TNFRSF1AP19438 455 aa16■□□□□ 0.15
SNX17-203ENST00000440760 PRDX2P32119 198 aa16■□□□□ 0.15
SNX17-203ENST00000440760 GABRA2P47869 451 aa16■□□□□ 0.15
SNX17-203ENST00000440760 OR3A1P47881 315 aa16■□□□□ 0.15
SNX17-203ENST00000440760 SWI5Q1ZZU3 235 aa16■□□□□ 0.15
SNX17-203ENST00000440760 FAM209AQ5JX71 171 aa16■□□□□ 0.15
SNX17-203ENST00000440760 AADACL3Q5VUY0 350 aa16■□□□□ 0.15
SNX17-203ENST00000440760 ZNF497Q6ZNH5 498 aa16■□□□□ 0.15
SNX17-203ENST00000440760 Q8TCH9 128 aa16■□□□□ 0.15
SNX17-203ENST00000440760 NECAP2Q9NVZ3 263 aa16■□□□□ 0.15
SNX17-203ENST00000440760 OR5H14A6NHG9 310 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 LMO1P25800 156 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 SLC36A1Q7Z2H8 476 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 LHFPL1Q86WI0 220 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 DEFB108BQ8NET1 73 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 OR11L1Q8NGX0 322 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 TERB2Q8NHR7 220 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 CHAC2Q8WUX2 184 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 ZNF2Q9BSG1 426 aaPredicted RBP15.99■□□□□ 0.15
SNX17-203ENST00000440760 OR51J1Q9H342 316 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 ZNF221Q9UK13 617 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 DCHS2Q6V1P9 2916 aa15.99■□□□□ 0.15
SNX17-203ENST00000440760 KMT2BQ9UMN6 2715 aaPredicted RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 A0A1B0GW55 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L2P0CJ85 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L3P0CJ86 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L4P0CJ87 422 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L5P0CJ88 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L6P0CJ89 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L7P0CJ90 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 SELLP14151 372 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 MDH2P40926 338 aaKnown RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 MECP2P51608 486 aaKnown RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 SNRPD2P62316 118 aaKnown RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 AESQ08117 197 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 HERPUD1Q15011 391 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4L9Q6RFH8 374 aaPredicted RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 GLDNQ6ZMI3 551 aaPredicted RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 FAM90A1Q86YD7 464 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 TPRX1Q8N7U7 411 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 UBALD1Q8TB05 177 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 EGLN1Q9GZT9 426 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 DUX4Q9UBX2 424 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 MEX3AA1L020 520 aaKnown RBP15.98■□□□□ 0.15
SNX17-203ENST00000440760 HMX3A6NHT5 357 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 IRF2P14316 349 aa15.98■□□□□ 0.15
SNX17-203ENST00000440760 IGFBP2P18065 325 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms