RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 SUMF2Q8NBJ7 301 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 TSPAN14Q8NG11 270 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 ZNF48Q96MX3 618 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-206ENST00000439717 DPCDQ9BVM2 203 aaPredicted RBP9.67□□□□□ -0.86
HSPG2-206ENST00000439717 GAL3ST2Q9H3Q3 398 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 ZNF696Q9H7X3 374 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 ZMAT3Q9HA38 289 aaKnown RBP9.67□□□□□ -0.86
HSPG2-206ENST00000439717 TAS2R3Q9NYW6 316 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 OR6C3Q9NZP0 311 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 STUB1Q9UNE7 303 aa9.67□□□□□ -0.86
HSPG2-206ENST00000439717 AK6Q9Y3D8 172 aaKnown RBP9.67□□□□□ -0.86
HSPG2-206ENST00000439717 TRIM77I1YAP6 450 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 HSPB6O14558 160 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 NPFFO15130 113 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 BPNT1O95861 308 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 GLAP06280 429 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 IGHV1-8P0DP01 117 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 MYL9P24844 172 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 FGF9P31371 208 aaPredicted RBP9.66□□□□□ -0.86
HSPG2-206ENST00000439717 GLIPR1P48060 266 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 KLRD1Q13241 179 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 NEDD8Q15843 81 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 TAF9Q16594 264 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 DEFB112Q30KQ8 113 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 MIDNQ504T8 468 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 HCP5Q6MZN7 132 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 PDZD9Q8IXQ8 264 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 PIP4P2Q8N4L2 257 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 TMEM104Q8NE00 496 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 OR13D1Q8NGV5 346 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 KCNG3Q8TAE7 436 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 COQ2Q96H96 371 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 Q96M66 194 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 GFI1Q99684 422 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 SELENOIQ9C0D9 397 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 BANF2Q9H503 90 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 PLGRKTQ9HBL7 147 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 VCX3AQ9NNX9 186 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 RCC2Q9P258 522 aaKnown RBP9.66□□□□□ -0.86
HSPG2-206ENST00000439717 SSR3Q9UNL2 185 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 V9GY05 133 aa9.66□□□□□ -0.86
HSPG2-206ENST00000439717 A0A0U1RQK1 487 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 MCRIP1C9JLW8 97 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 CLDN34H7C241 214 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 CLPXO76031 633 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 MPIG6BO95866 241 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 VSIG8P0DPA2 414 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ARSBP15848 533 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 DLX1P56177 255 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 BAMBIQ13145 260 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 RBM39Q14498 530 aaKnown RBP9.65□□□□□ -0.86
HSPG2-206ENST00000439717 RAB11BQ15907 218 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ATAD3CQ5T2N8 411 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 RSBN1Q5VWQ0 802 aaPredicted RBP9.65□□□□□ -0.86
HSPG2-206ENST00000439717 C22orf42Q6IC83 251 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 SLC35E4Q6ICL7 350 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 Q6YL49 198 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 OR2W3Q7Z3T1 314 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ZDHHC22Q8N966 263 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ZNF565Q8N9K5 539 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 FAM46BQ96A09 425 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ESM1Q9NQ30 184 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 TXNL4BQ9NX01 149 aaKnown RBP9.65□□□□□ -0.86
HSPG2-206ENST00000439717 ZNF581Q9P0T4 197 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 FAM96BQ9Y3D0 163 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 SOX21Q9Y651 276 aaPredicted RBP9.65□□□□□ -0.86
HSPG2-206ENST00000439717 SESN1Q9Y6P5 492 aa9.65□□□□□ -0.86
HSPG2-206ENST00000439717 FBN1P35555 2871 aaKnown RBP9.65□□□□□ -0.87
HSPG2-206ENST00000439717 MEIKINA0A087WXM9 373 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM30CPA0ZSE6 113 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 MEX3AA1L020 520 aaKnown RBP9.64□□□□□ -0.87
HSPG2-206ENST00000439717 MEIOCA2RUB1 952 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TRIM64CA6NLI5 447 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 ZNF729A6NN14 1252 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-206ENST00000439717 RNF212BA8MTL3 300 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM14DPA8MWL7 114 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 FBP1P09467 338 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 RAB3BP20337 219 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 FUT3P21217 361 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 CFPP27918 469 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 SAA4P35542 130 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 RPS27AP62979 156 aaKnown RBP9.64□□□□□ -0.87
HSPG2-206ENST00000439717 QRFPP83859 136 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 PRB3Q04118 309 aaPredicted RBP9.64□□□□□ -0.87
HSPG2-206ENST00000439717 KRTAP24-1Q3LI83 254 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 OR52W1Q6IF63 320 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 RAB12Q6IQ22 244 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 HEPN1Q6WQI6 88 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 LDLRAD3Q86YD5 345 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM86BQ8N661 226 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 OR11H6Q8NGC7 330 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 PLPPR1Q8TBJ4 325 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 FAM216AQ8WUB2 273 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TM2D1Q9BX74 207 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 TMEM59Q9BXS4 323 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 ING3Q9NXR8 418 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 FBLN5Q9UBX5 448 aa9.64□□□□□ -0.87
HSPG2-206ENST00000439717 STEAP1Q9UHE8 339 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms