RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 BUB1B-PAK6H3BSN5 160 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 TOR1AO14656 332 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 WBP4O75554 376 aaKnown RBP9.19□□□□□ -0.94
IRF1-204ENST00000439555 VSIG8P0DPA2 414 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 BLCAPP62952 87 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 SCN1BQ07699 218 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 ZSCAN26Q16670 478 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 C17orf58Q2M2W7 97 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 HLA-DRB5Q30154 266 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 NHLRC3Q5JS37 347 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 PRAMEF5Q5TYX0 476 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 ZNF555Q8NEP9 628 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 CNIH3Q8TBE1 160 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 TSEN15Q8WW01 171 aaKnown RBP9.19□□□□□ -0.94
IRF1-204ENST00000439555 STMN2Q93045 179 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 OCSTAMPQ9BR26 566 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 IFT22Q9H7X7 185 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 TMEM138Q9NPI0 162 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 PCDHB16Q9NRJ7 776 aa9.19□□□□□ -0.94
IRF1-204ENST00000439555 DNAH9Q9NYC9 4486 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 TRAV24A0A0B4J272 114 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 H0YJX3 145 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 M0QZK8 103 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 OGG1O15527 345 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 XPNPEP2O43895 674 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 PEX14O75381 377 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 PRB2P02812 416 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 C21orf33P30042 268 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 MNDAP41218 407 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 HABP2Q14520 560 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 TTC23Q5W5X9 447 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 THNSL2Q86YJ6 484 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 C11orf44Q8N8P7 122 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 OR4F17Q8NGA8 305 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 OR10A7Q8NGE5 316 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 OR9G1Q8NH87 305 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 TNFAIP8L1Q8WVP5 186 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 CAPSLQ8WWF8 208 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 RGP1Q92546 391 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 KIRREL1Q96J84 757 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 OR4F4Q96R69 305 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 GPER1Q99527 375 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 ZNF286AQ9HBT8 521 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 PAK1IP1Q9NWT1 392 aaPredicted RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 BABAM2Q9NXR7 383 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 IL36GQ9NZH8 169 aa9.18□□□□□ -0.94
IRF1-204ENST00000439555 DIMT1Q9UNQ2 313 aaKnown RBP9.18□□□□□ -0.94
IRF1-204ENST00000439555 NPIPB11E5RHQ5 1161 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 GABRPO00591 440 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 ZNF780AO75290 641 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 GPX5O75715 221 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 OR2F2O95006 317 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 BAG2O95816 211 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 CD28P10747 220 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 JUNBP17275 347 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 MYL12AP19105 171 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 GZMHP20718 246 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 GDNFP39905 211 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 VDAC2P45880 294 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 ETV1P50549 477 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 PPP3R1P63098 170 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 CD83Q01151 205 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 MED21Q13503 144 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 ATXN7L3Q14CW9 347 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 RSU1Q15404 277 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 SMN1Q16637 294 aaKnown RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 PAN3Q58A45 887 aaKnown RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 TPTE2P1Q5T6R2 138 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 BAIAP2L2Q6UXY1 529 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 Q6ZS46 218 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 LINC00596Q86U02 117 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 PACRGLQ8N7B6 248 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 OR51A2Q8NGJ7 313 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 OR52N1Q8NH53 320 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 TMEM106AQ96A25 262 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 SMIM19Q96E16 107 aa9.17□□□□□ -0.94
IRF1-204ENST00000439555 RBM14Q96PK6 669 aaKnown RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 CITED2Q99967 270 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 PPIL3Q9H2H8 161 aaKnown RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 EXOSC1Q9Y3B2 195 aaKnown RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 AMMECR1Q9Y4X0 333 aaPredicted RBP9.17□□□□□ -0.94
IRF1-204ENST00000439555 NOTCH3Q9UM47 2321 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 MEIKINA0A087WXM9 373 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A18PA6NE21 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A16PA6NEW6 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A20PA6NIJ5 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A9PA6NNJ1 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 ADARB2-AS1A8MUL3 147 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A12PA8MX19 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A5PA8MXJ8 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 IL1AP01583 271 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A15PP0C7V4 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A13PP0C7W8 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A14PP0C7W9 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM90A24PP0C7X0 464 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 FAM106CPP0CH98 169 aa9.16□□□□□ -0.94
IRF1-204ENST00000439555 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
IRF1-204ENST00000439555 SOX2P48431 317 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms