RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 ZNF497Q6ZNH5 498 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 MOB1BQ7L9L4 216 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 ZNF554Q86TJ5 538 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 KRTAP1-3Q8IUG1 177 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 ZNRF1Q8ND25 227 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 OR4S1Q8NGB4 309 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 CLDND2Q8NHS1 167 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 FAAP24Q9BTP7 215 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 AKIP1Q9NQ31 210 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 ETAA1Q9NY74 926 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 CLN8Q9UBY8 286 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 HECTD1Q9ULT8 2610 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 MGAT4AQ9UM21 535 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 V9GYH0 126 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 APCP25054 2843 aa10.54□□□□□ -0.72
SCLT1-202ENST00000439369 NAV2Q8IVL1 2488 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 A0A0G2JMP0 313 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 A0A0X1KG70 313 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 SSBP1Q04837 148 aaKnown RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 LSAMPQ13449 338 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 ARFRP1Q13795 201 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 IL18Q14116 193 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 RSBN1Q5VWQ0 802 aaPredicted RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 WDR25Q64LD2 544 aaPredicted RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 TRAT1Q6PIZ9 186 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 MFSD4AQ8N468 514 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 OR4M2Q8NGB6 313 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 C8orf46Q8TAG6 207 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 CMSS1Q9BQ75 279 aaKnown RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 OR6C3Q9NZP0 311 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 AK3Q9UIJ7 227 aa10.53□□□□□ -0.72
SCLT1-202ENST00000439369 MRPS7Q9Y2R9 242 aaKnown RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 POLR3KQ9Y2Y1 108 aaPredicted RBP10.53□□□□□ -0.72
SCLT1-202ENST00000439369 CENPEQ02224 2701 aa10.52□□□□□ -0.72
SCLT1-202ENST00000439369 ABCA12Q86UK0 2595 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 A0A096LNT2 108 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ODAMA1E959 279 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 UBE2QL1A1L167 161 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 TMEM235A6NFC5 223 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 GABARAPH6UMI1 98 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 HSPB6O14558 160 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 GSTZ1O43708 216 aaPredicted RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 FOXH1O75593 365 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 MT-ND4P03905 459 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 TFF1P04155 84 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 LPLP06858 475 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 SELLP14151 372 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 NDUFB7P17568 137 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 GNB2P62879 340 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF846Q147U1 533 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ATXN7L3Q14CW9 347 aaPredicted RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 CR1LQ2VPA4 569 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 KRBOX4Q5JUW0 171 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 Q6ZS49 121 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 IZUMO1Q8IYV9 350 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 BPIFB2Q8N4F0 458 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 GDPD1Q8N9F7 314 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 GPX8Q8TED1 209 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 SMIM4Q8WVI0 70 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 COQ2Q96H96 371 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ABHD1Q96SE0 405 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 OCSTAMPQ9BR26 566 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 WDR12Q9GZL7 423 aaKnown RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ZMAT3Q9HA38 289 aaKnown RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 RAB9BQ9NP90 201 aa10.52□□□□□ -0.73
SCLT1-202ENST00000439369 MBNL3Q9NUK0 354 aaKnown RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF107Q9UII5 783 aaPredicted RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 ANKRD17O75179 2603 aaKnown RBP10.52□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1B0GW55 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 A0A1W2PPH5 198 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 hADV38S2A0JD32 116 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 INHBBP09529 407 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L2P0CJ85 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L3P0CJ86 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L4P0CJ87 422 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L5P0CJ88 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L6P0CJ89 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L7P0CJ90 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 CD40LGP29965 261 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 AESQ08117 197 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF79Q15937 498 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 C6orf183Q5T699 404 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 OLFML2AQ68BL7 652 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 ZNF880Q6PDB4 577 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4L9Q6RFH8 374 aaPredicted RBP10.51□□□□□ -0.73
SCLT1-202ENST00000439369 SNX29P2Q8IUI4 249 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 FCAMRQ8WWV6 532 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 CORO2AQ92828 525 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 Q96MF0 132 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DCTN5Q9BTE1 182 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 REG4Q9BYZ8 158 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 DUX4Q9UBX2 424 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 OPN4Q9UHM6 478 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 KIF25Q9UIL4 384 aa10.51□□□□□ -0.73
SCLT1-202ENST00000439369 ANAPC10Q9UM13 185 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms