RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TSC22D1Q15714 1073 aa13.21□□□□□ -0.29
APP-208ENST00000439274 SELENOHQ8IZQ5 122 aaKnown RBP13.21□□□□□ -0.29
APP-208ENST00000439274 TMEM217Q8N7C4 229 aa13.21□□□□□ -0.29
APP-208ENST00000439274 OR56B2PQ8NGI1 322 aa13.21□□□□□ -0.29
APP-208ENST00000439274 KCNE4Q8WWG9 221 aa13.21□□□□□ -0.29
APP-208ENST00000439274 TUBA4BQ9H853 241 aa13.21□□□□□ -0.29
APP-208ENST00000439274 ZNF391Q9UJN7 358 aa13.21□□□□□ -0.29
APP-208ENST00000439274 PILRBQ9UKJ0 227 aa13.21□□□□□ -0.29
APP-208ENST00000439274 A0A096LPE4 126 aa13.21□□□□□ -0.29
APP-208ENST00000439274 A0A1W2PPZ6 126 aa13.21□□□□□ -0.29
APP-208ENST00000439274 PATE3B3GLJ2 98 aa13.21□□□□□ -0.29
APP-208ENST00000439274 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
APP-208ENST00000439274 RPL36A-HNRNPH2H7BZ11 118 aa13.21□□□□□ -0.29
APP-208ENST00000439274 HSD17B6O14756 317 aa13.21□□□□□ -0.29
APP-208ENST00000439274 CDS2O95674 445 aa13.21□□□□□ -0.29
APP-208ENST00000439274 TMEM50AO95807 157 aa13.21□□□□□ -0.29
APP-208ENST00000439274 NQO2P16083 231 aa13.21□□□□□ -0.29
APP-208ENST00000439274 HERPUD1Q15011 391 aa13.21□□□□□ -0.29
APP-208ENST00000439274 ODF3L1Q8IXM7 274 aa13.21□□□□□ -0.29
APP-208ENST00000439274 ZNF565Q8N9K5 539 aa13.21□□□□□ -0.29
APP-208ENST00000439274 OR1J1Q8NGS3 322 aa13.21□□□□□ -0.29
APP-208ENST00000439274 LILRB1Q8NHL6 650 aaPredicted RBP13.21□□□□□ -0.29
APP-208ENST00000439274 FREM1Q5H8C1 2179 aa13.21□□□□□ -0.3
APP-208ENST00000439274 WDFY4Q6ZS81 3184 aa13.21□□□□□ -0.3
APP-208ENST00000439274 TNFSF12O43508 249 aa13.2□□□□□ -0.3
APP-208ENST00000439274 EPHA1P21709 976 aa13.2□□□□□ -0.3
APP-208ENST00000439274 HAAOP46952 286 aa13.2□□□□□ -0.3
APP-208ENST00000439274 GPM6AP51674 278 aa13.2□□□□□ -0.3
APP-208ENST00000439274 PCBD1P61457 104 aa13.2□□□□□ -0.3
APP-208ENST00000439274 TRIM61Q5EBN2 209 aa13.2□□□□□ -0.3
APP-208ENST00000439274 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
APP-208ENST00000439274 TMEM252Q8N6L7 170 aa13.2□□□□□ -0.3
APP-208ENST00000439274 KDF1Q8NAX2 398 aaPredicted RBP13.2□□□□□ -0.3
APP-208ENST00000439274 SUMF2Q8NBJ7 301 aa13.2□□□□□ -0.3
APP-208ENST00000439274 OR5C1Q8NGR4 320 aa13.2□□□□□ -0.3
APP-208ENST00000439274 SGCZQ96LD1 299 aa13.2□□□□□ -0.3
APP-208ENST00000439274 DYNLT3P51808 116 aa13.2□□□□□ -0.3
APP-208ENST00000439274 RPS23P62266 143 aaKnown RBP13.2□□□□□ -0.3
APP-208ENST00000439274 S100A12P80511 92 aa13.2□□□□□ -0.3
APP-208ENST00000439274 RUNX1Q01196 453 aa13.2□□□□□ -0.3
APP-208ENST00000439274 RHEBQ15382 184 aa13.2□□□□□ -0.3
APP-208ENST00000439274 HAGHQ16775 308 aa13.2□□□□□ -0.3
APP-208ENST00000439274 SOHLH1Q5JUK2 328 aa13.2□□□□□ -0.3
APP-208ENST00000439274 TMEM56Q96MV1 263 aa13.2□□□□□ -0.3
APP-208ENST00000439274 C1QTNF5Q9BXJ0 243 aa13.2□□□□□ -0.3
APP-208ENST00000439274 TMEM56-RWDD3S4R434 201 aa13.2□□□□□ -0.3
APP-208ENST00000439274 PITX3O75364 302 aa13.19□□□□□ -0.3
APP-208ENST00000439274 FBP1P09467 338 aa13.19□□□□□ -0.3
APP-208ENST00000439274 OR8U8P0C7N1 319 aa13.19□□□□□ -0.3
APP-208ENST00000439274 GDF1P27539 372 aa13.19□□□□□ -0.3
APP-208ENST00000439274 PLEKHF2Q9H8W4 249 aa13.19□□□□□ -0.3
APP-208ENST00000439274 Q9N2K0 584 aa13.19□□□□□ -0.3
APP-208ENST00000439274 CCL28Q9NRJ3 127 aa13.19□□□□□ -0.3
APP-208ENST00000439274 PLSCR2Q9NRY7 297 aa13.19□□□□□ -0.3
APP-208ENST00000439274 LYRM2Q9NU23 88 aaPredicted RBP13.19□□□□□ -0.3
APP-208ENST00000439274 ZNF407Q9C0G0 2248 aa13.19□□□□□ -0.3
APP-208ENST00000439274 RBFOX3A6NFN3 312 aa13.19□□□□□ -0.3
APP-208ENST00000439274 SLC22A20A6NK97 555 aa13.19□□□□□ -0.3
APP-208ENST00000439274 LINC00587B1AMM8 73 aa13.19□□□□□ -0.3
APP-208ENST00000439274 TK1P04183 234 aa13.19□□□□□ -0.3
APP-208ENST00000439274 FOXG1P55316 489 aaPredicted RBP13.19□□□□□ -0.3
APP-208ENST00000439274 VAMP2P63027 116 aa13.19□□□□□ -0.3
APP-208ENST00000439274 PRDX4Q13162 271 aa13.19□□□□□ -0.3
APP-208ENST00000439274 ZNF266Q14584 549 aa13.19□□□□□ -0.3
APP-208ENST00000439274 RIPPLY2Q5TAB7 128 aa13.19□□□□□ -0.3
APP-208ENST00000439274 PMS2CLQ68D20 193 aa13.19□□□□□ -0.3
APP-208ENST00000439274 PPP1R32Q7Z5V6 425 aa13.19□□□□□ -0.3
APP-208ENST00000439274 NEK7Q8TDX7 302 aa13.19□□□□□ -0.3
APP-208ENST00000439274 SPSB4Q96A44 273 aa13.19□□□□□ -0.3
APP-208ENST00000439274 IER2Q9BTL4 223 aa13.19□□□□□ -0.3
APP-208ENST00000439274 MUC3AQ02505 3323 aa13.19□□□□□ -0.3
APP-208ENST00000439274 IGKV1-6A0A0C4DH72 117 aa13.18□□□□□ -0.3
APP-208ENST00000439274 ZNF727A8MUV8 499 aa13.18□□□□□ -0.3
APP-208ENST00000439274 S100A9P06702 114 aaKnown RBP13.18□□□□□ -0.3
APP-208ENST00000439274 SMIM6P0DI80 62 aa13.18□□□□□ -0.3
APP-208ENST00000439274 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
APP-208ENST00000439274 SRPXP78539 464 aa13.18□□□□□ -0.3
APP-208ENST00000439274 SRYQ05066 204 aa13.18□□□□□ -0.3
APP-208ENST00000439274 LFNGQ8NES3 379 aa13.18□□□□□ -0.3
APP-208ENST00000439274 SIGLEC12Q96PQ1 595 aa13.18□□□□□ -0.3
APP-208ENST00000439274 FAM86C1Q9NVL1 165 aa13.18□□□□□ -0.3
APP-208ENST00000439274 LIPGQ9Y5X9 500 aa13.18□□□□□ -0.3
APP-208ENST00000439274 NTN3O00634 580 aaPredicted RBP13.18□□□□□ -0.3
APP-208ENST00000439274 ATXN7O15265 892 aaPredicted RBP13.18□□□□□ -0.3
APP-208ENST00000439274 TXNL1O43396 289 aa13.18□□□□□ -0.3
APP-208ENST00000439274 OR2C1O95371 312 aa13.18□□□□□ -0.3
APP-208ENST00000439274 IGHV2-5P01817 119 aa13.18□□□□□ -0.3
APP-208ENST00000439274 HLA-HP01893 362 aa13.18□□□□□ -0.3
APP-208ENST00000439274 HOXA6P31267 233 aa13.18□□□□□ -0.3
APP-208ENST00000439274 RND3P61587 244 aa13.18□□□□□ -0.3
APP-208ENST00000439274 ARF1P84077 181 aaKnown RBP13.18□□□□□ -0.3
APP-208ENST00000439274 ZNF154Q13106 437 aa13.18□□□□□ -0.3
APP-208ENST00000439274 FAM185AQ8N0U4 392 aa13.18□□□□□ -0.3
APP-208ENST00000439274 PLPPR1Q8TBJ4 325 aa13.18□□□□□ -0.3
APP-208ENST00000439274 NIT2Q9NQR4 276 aa13.18□□□□□ -0.3
APP-208ENST00000439274 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
APP-208ENST00000439274 METTL1Q9UBP6 276 aaKnown RBP13.18□□□□□ -0.3
APP-208ENST00000439274 ZNF503-AS2A6NEH8 195 aa13.17□□□□□ -0.3
APP-208ENST00000439274 CYTIPO60759 359 aa13.17□□□□□ -0.3
APP-208ENST00000439274 NAPSAO96009 420 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms