RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 FAHD2BQ6P2I3 314 aaPredicted RBP8.13□□□□□ -1.11
CUX1-206ENST00000437600 SLC16A13Q7RTY0 426 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SGPP2Q8IWX5 399 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SPACA3Q8IXA5 215 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ZFP62Q8NB50 900 aaPredicted RBP8.13□□□□□ -1.11
CUX1-206ENST00000437600 RDH5Q92781 318 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 FAHD2AQ96GK7 314 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 IP6K3Q96PC2 410 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 FAM117AQ9C073 453 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 IGSF10Q6WRI0 2623 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 USP24Q9UPU5 2620 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 TRGV5A0A0B4J1U4 118 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 A0A1B0GW55 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ZNF705EA8MWA4 302 aaPredicted RBP8.13□□□□□ -1.11
CUX1-206ENST00000437600 DNPH1O43598 174 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L2P0CJ85 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L3P0CJ86 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L4P0CJ87 422 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L5P0CJ88 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L6P0CJ89 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 DUX4L7P0CJ90 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 MPZP25189 248 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ALDH3B1P43353 468 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ABCA11PQ4W5N1 156 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SPIN3Q5JUX0 258 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ZNF100Q8IYN0 542 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 OR52M1Q8NGK5 317 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.13□□□□□ -1.113e-6■■□□□ 13.5
CUX1-206ENST00000437600 DUX4Q9UBX2 424 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 C1QTNF9BB2RNN3 333 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ZNF732B4DXR9 585 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 C1QTNF9P0C862 333 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 ZNF728P0DKX0 622 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SPP1P10451 314 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 FHITP49789 147 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 TAS2R31P59538 309 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SRSF4Q08170 494 aaKnown RBP8.13□□□□□ -1.11
CUX1-206ENST00000437600 COTL1Q14019 142 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 GUCA2BQ16661 112 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 OR2T2Q6IF00 324 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 IGF2-ASQ6U949 168 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 LDLRAD3Q86YD5 345 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 PUSL1Q8N0Z8 303 aaKnown RBP8.13□□□□□ -1.11
CUX1-206ENST00000437600 C2orf50Q96LR7 162 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 NMES1Q9C002 83 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 MTCH1Q9NZJ7 389 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 PLA2G2EQ9NZK7 142 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 GHRLQ9UBU3 117 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 PQLC2LA1A4F0 135 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 RHBDL1O75783 438 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 EIF3GO75821 320 aaKnown RBP eCLIP8.12□□□□□ -1.11
CUX1-206ENST00000437600 C1QL1O75973 258 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 CELA3BP08861 270 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 ERVS71-1P61550 626 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 PRDX4Q13162 271 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 ZNF345Q14585 488 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 CNN3Q15417 329 aaKnown RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 SNIP1Q8TAD8 396 aaKnown RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 SFT2D1Q8WV19 159 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 SECTM1Q8WVN6 248 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 EXTL1Q92935 676 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 ERGIC1Q969X5 290 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 SPSB1Q96BD6 273 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 APH1AQ96BI3 265 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 RAB18Q9NP72 206 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 ANAPC10Q9UM13 185 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 MRPS18CQ9Y3D5 142 aaKnown RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 PHF1O43189 567 aaPredicted RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 AADACP22760 399 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 OMGP23515 440 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 NHLH2Q02577 135 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 IZUMO4Q1ZYL8 232 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 C20orf204Q6ZNR8 217 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 POC1AQ8NBT0 407 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 HPSE2Q8WWQ2 592 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 POM121Q96HA1 1249 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 NUDT16L1Q9BRJ7 211 aaKnown RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 MAGT1Q9H0U3 335 aa8.12□□□□□ -1.11
CUX1-206ENST00000437600 HEATR1Q9H583 2144 aaKnown RBP8.12□□□□□ -1.11
CUX1-206ENST00000437600 ZNF816-ZNF321PA0A0X1KG74 233 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TFF1P04155 84 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 ACAA1P09110 424 aaPredicted RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 CBR1P16152 277 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CA6P23280 308 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 FUT6P51993 359 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TMEM33P57088 247 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CYCSP99999 105 aaKnown RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 MALLQ13021 153 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 ALKBH6Q3KRA9 238 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 ACTBL2Q562R1 376 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CFAP161Q6P656 301 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 PRSS54Q6PEW0 395 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 CLEC2AQ6UVW9 174 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 MRPL21Q7Z2W9 205 aaKnown RBP8.11□□□□□ -1.11
CUX1-206ENST00000437600 TMEM178AQ8NBL3 297 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 GLYATL2Q8WU03 294 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 TP53RKQ96S44 253 aa8.11□□□□□ -1.11
CUX1-206ENST00000437600 BCO1Q9HAY6 547 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms