RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SMIM4Q8WVI0 70 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 FCAMRQ8WWV6 532 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 DYRK2Q92630 601 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 NRGNQ92686 78 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 RDH5Q92781 318 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 BORCS5Q969J3 196 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 TRIM63Q969Q1 353 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 NEDD4LQ96PU5 975 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 THAP7Q9BT49 309 aaPredicted RBP5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 CCDC32Q9BV29 185 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 CXorf56Q9H5V9 222 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PLEKHJ1Q9NW61 149 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 KLK11Q9UBX7 282 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 OR14J1Q9UGF5 321 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 AK3Q9UIJ7 227 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF222Q9UK12 451 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PLEKHA6Q9Y2H5 1048 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 NPTNQ9Y639 398 aa5.87□□□□□ -1.47
LSM3P3-201ENST00000436601 PRR14LQ5THK1 2151 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 PPIAL4EA0A075B759 164 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 A0A1B0GW55 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 UBE2QL1A1L167 161 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 OOEPA6NGQ2 149 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SERPINE3A8MV23 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MCRIP1C9JLW8 97 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 PPIAL4DF5H284 164 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 GABARAPH6UMI1 98 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SIRPB1O00241 398 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 HSPB6O14558 160 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ORC5O43913 435 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF737O75373 536 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 CA11O75493 328 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 UPK1BO75841 260 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 FSTL3O95633 263 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 IGHV4-39P01824 125 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 GLAP06280 429 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L2P0CJ85 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L3P0CJ86 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L4P0CJ87 422 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L5P0CJ88 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L6P0CJ89 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L7P0CJ90 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 PPIAL4FP0DN26 164 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ZNF44P15621 663 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MUC1P15941 1255 aaPredicted RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MALP21145 153 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SSTR2P30874 369 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 EFNA4P52798 201 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MRPS10P82664 201 aaKnown RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SRSF3P84103 164 aaKnown RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 COL10A1Q03692 680 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ZMYND11Q15326 602 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 PNLIPRP3Q17RR3 467 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MICBQ29980 383 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 FAM209BQ5JX69 171 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ATPAF1Q5TC12 328 aaPredicted RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4L9Q6RFH8 374 aaPredicted RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 FIP1L1Q6UN15 594 aaKnown RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 Q6ZPA2 131 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 C17orf107Q6ZR85 190 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DCDC5Q6ZRR9 648 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 C1orf87Q8N0U7 546 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 OR8H2Q8N162 312 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 OR4S1Q8NGB4 309 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ZFAND2BQ8WV99 257 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 NUDCD2Q8WVJ2 157 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SDSLQ96GA7 329 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 CCL19Q99731 98 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 HDHD3Q9BSH5 251 aaPredicted RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DPCDQ9BVM2 203 aaPredicted RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SHARPINQ9H0F6 387 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SCPEP1Q9HB40 452 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 SPACA1Q9HBV2 294 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 TMEM165Q9HC07 324 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 ABCB10Q9NRK6 738 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DNAJB11Q9UBS4 358 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 DUX4Q9UBX2 424 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MTFP1Q9UDX5 166 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 GLS2Q9UI32 602 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 RBMX2Q9Y388 322 aaKnown RBP5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 PPIAL4AQ9Y536 164 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 MAB21L2Q9Y586 359 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 CHD6Q8TD26 2715 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 HIVEP3Q5T1R4 2406 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 NBASA2RRP1 2371 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 RTTNQ86VV8 2226 aa5.86□□□□□ -1.47
LSM3P3-201ENST00000436601 TRAV38-1A0A0B4J264 116 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 A0A1W2PQ09 198 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 MEIS3P1A6NDR6 274 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 SULT1C2O00338 296 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 FCN3O75636 299 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 IGHV2-70P01814 119 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 GYPAP02724 150 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 FCER2P06734 321 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 GABRA2P47869 451 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 OR3A1P47881 315 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 GNG2P59768 71 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 BTG1P62324 171 aa5.85□□□□□ -1.47
LSM3P3-201ENST00000436601 DCTN2Q13561 401 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms