RNA–Protein interactions for RNA: ENST00000435823.1

COL28A1-203, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL28A1, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-203ENST00000435823 FAM27D1Q5T7N8 215 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 ZNF782Q6ZMW2 699 aaPredicted RBP9.36□□□□□ -0.91
COL28A1-203ENST00000435823 C11orf42Q8N5U0 333 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 OR13D1Q8NGV5 346 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 BARHL1Q9BZE3 327 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 ING3Q9NXR8 418 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 GHRLQ9UBU3 117 aa9.36□□□□□ -0.91
COL28A1-203ENST00000435823 TRAV24A0A0B4J272 114 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 ODAMA1E959 279 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 HSPB6O14558 160 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 MELTFP08582 738 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 IGHV1-8P0DP01 117 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 GABRA5P31644 462 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 SAA4P35542 130 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 GLIPR1P48060 266 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 KCNJ3P48549 501 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 LGALS4P56470 323 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 EMX1Q04741 257 aaPredicted RBP9.35□□□□□ -0.91
COL28A1-203ENST00000435823 ATAD3CQ5T2N8 411 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 TCF23Q7RTU1 214 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 LDLRAD3Q86YD5 345 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 PNKDQ8N490 385 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 TMEM86BQ8N661 226 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 OR4D6Q8NGJ1 314 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 SSMEM1Q8WWF3 244 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 FCGR1BQ92637 280 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 GCDHQ92947 438 aaPredicted RBP9.35□□□□□ -0.91
COL28A1-203ENST00000435823 MRPS24Q96EL2 167 aaKnown RBP9.35□□□□□ -0.91
COL28A1-203ENST00000435823 C1orf147Q96MC9 270 aaPredicted RBP9.35□□□□□ -0.91
COL28A1-203ENST00000435823 CST11Q9H112 138 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 DPAGT1Q9H3H5 408 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 IFT22Q9H7X7 185 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 SPACA1Q9HBV2 294 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 TAS2R3Q9NYW6 316 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 OR6C3Q9NZP0 311 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 LRRC42Q9Y546 428 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 POMT1Q9Y6A1 747 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 DSCAML1Q8TD84 2053 aa9.35□□□□□ -0.91
COL28A1-203ENST00000435823 A0A1W2PP11 408 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 BTBD17A6NE02 478 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 GEMIN2O14893 280 aaKnown RBP9.34□□□□□ -0.91
COL28A1-203ENST00000435823 CRTAPO75718 401 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-203ENST00000435823 CLPXO76031 633 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 UBBP0CG47 229 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 HCP5Q6MZN7 132 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 LRRTM1Q86UE6 522 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 LYPD6Q86Y78 171 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 SPARTQ8N0X7 666 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 SUMF2Q8NBJ7 301 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 NEK7Q8TDX7 302 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 CORO2AQ92828 525 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 COQ2Q96H96 371 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 DPCDQ9BVM2 203 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-203ENST00000435823 TNFRSF19Q9NS68 423 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 SESN1Q9Y6P5 492 aa9.34□□□□□ -0.91
COL28A1-203ENST00000435823 MEIKINA0A087WXM9 373 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM89A2RUT3 159 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 H3BUI4 141 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 IGHV4-59P01825 116 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 ARG1P05089 322 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 MGMTP16455 207 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 CALRP27797 417 aaKnown RBP9.33□□□□□ -0.92
COL28A1-203ENST00000435823 PSMB9P28065 219 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 GLP1RP43220 463 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 RANBP1P43487 201 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 IER3P46695 156 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 GP2P55259 537 aaKnown RBP9.33□□□□□ -0.92
COL28A1-203ENST00000435823 FABP5Q01469 135 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 DYNC1I2Q13409 638 aaKnown RBP9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TAF9Q16594 264 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 C1orf100Q5SVJ3 147 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 UBE2UQ5VVX9 321 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 OR52W1Q6IF63 320 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 C16orf87Q6PH81 154 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF773Q6PK81 442 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 C12orf54Q6X4T0 127 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM91Q6ZNR0 172 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF565Q8N9K5 539 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 OR6M1Q8NGM8 313 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 SELENOIQ9C0D9 397 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 PPIL3Q9H2H8 161 aaKnown RBP9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM133Q9H2Q1 129 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 NCOR1P1Q9H4R4 102 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 BANF2Q9H503 90 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 NDUFB11Q9NX14 153 aa9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TBL2Q9Y4P3 447 aaKnown RBP9.33□□□□□ -0.92
COL28A1-203ENST00000435823 TMEM30CPA0ZSE6 113 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A10PA6NDY2 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A18PA6NE21 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A16PA6NEW6 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A20PA6NIJ5 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A8PA6NJQ4 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A7PA6NKC0 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 ZNF729A6NN14 1252 aaPredicted RBP9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A22PA8MWA6 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A12PA8MX19 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A5PA8MXJ8 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 FAM90A23PA8MXZ1 464 aa9.32□□□□□ -0.92
COL28A1-203ENST00000435823 MCRIP1C9JLW8 97 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms