RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 OCSTAMPQ9BR26 566 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 HDHD3Q9BSH5 251 aaPredicted RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 CHST6Q9GZX3 395 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 C12orf4Q9NQ89 552 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 CBLN4Q9NTU7 201 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF701Q9NV72 531 aaPredicted RBP9.46□□□□□ -0.9
LINC00539-203ENST00000434601 OR14J1Q9UGF5 321 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 PPP1R3CQ9UQK1 317 aa9.46□□□□□ -0.9
LINC00539-203ENST00000434601 LRRC30A6NM36 301 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF736B4DX44 427 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 SIRPB1O00241 398 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 SLC33A1O00400 549 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CYB5R3P00387 301 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 LHBP01229 141 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CD74P04233 296 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CD3DP04234 171 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 PAX1P15863 534 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 AMY2BP19961 511 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 TBPP20226 339 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 HLA-DMAP28067 261 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CD80P33681 288 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CEBPDP49716 269 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 RBM39Q14498 530 aaKnown RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 ACTBL2Q562R1 376 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 PAN3Q58A45 887 aaKnown RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 OR52W1Q6IF63 320 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CCBE1Q6UXH8 406 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 DTX2Q86UW9 622 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 HOGA1Q86XE5 327 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 CIARTQ8N365 385 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 BOLLQ8N9W6 283 aaKnown RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 RDH5Q92781 318 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 SNAPC3Q92966 411 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 DPCDQ9BVM2 203 aaPredicted RBP9.45□□□□□ -0.9
LINC00539-203ENST00000434601 DPAGT1Q9H3H5 408 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 MCUBQ9NWR8 336 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 NLKQ9UBE8 527 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 DNAJB11Q9UBS4 358 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 WIPI2Q9Y4P8 454 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 MXRA5Q9NR99 2828 aa9.45□□□□□ -0.9
LINC00539-203ENST00000434601 IGHV3OR15-7A0A075B7D8 119 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 RFPL4AA6NLU0 287 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 RFPL4AL1F8VTS6 287 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 IFNL4K9M1U5 179 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 RAB3DO95716 219 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 FCGR3AP08637 254 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 DANCRP0C864 163 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 LMO1P25800 156 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 SLC6A1P30531 599 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 RBMXP38159 391 aaKnown RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 MDH2P40926 338 aaKnown RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 MEF2DQ14814 521 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 PLA1AQ53H76 456 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 RNASE10Q5GAN6 216 aaKnown RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 FAAP20Q6NZ36 180 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 PRIMA1Q86XR5 153 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 C1orf87Q8N0U7 546 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 BEST4Q8NFU0 473 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 OR4S1Q8NGB4 309 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 OR4D10Q8NGI6 311 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 TRAF4Q9BUZ4 470 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 SEBOXQ9HB31 216 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 CHMP1AQ9HD42 196 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 ETAA1Q9NY74 926 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 TREM2Q9NZC2 230 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF230Q9UIE0 474 aaPredicted RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 ABCA1O95477 2261 aa9.44□□□□□ -0.9
LINC00539-203ENST00000434601 SONP18583 2426 aaKnown RBP9.44□□□□□ -0.9
LINC00539-203ENST00000434601 A0A1B0GVG6 124 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 OOEPA6NGQ2 149 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 OR2AT4A6NND4 320 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 M0QYG6 137 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 NAPSAO96009 420 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 HPXP02790 462 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 SOD3P08294 240 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 PSG2P11465 335 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 GIFP27352 417 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 TAS2R46P59540 309 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 COL10A1Q03692 680 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 PLET1Q6UQ28 207 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF782Q6ZMW2 699 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-203ENST00000434601 GLCCI1Q86VQ1 547 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 BPIFB2Q8N4F0 458 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 DUSP18Q8NEJ0 188 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 OR4K15Q8NH41 348 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 MAFIPQ8WZ33 124 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 VRK1Q99986 396 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-203ENST00000434601 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 TINAGL1Q9GZM7 467 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-203ENST00000434601 MMP28Q9H239 520 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 PPA2Q9H2U2 334 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 RIMS4Q9H426 269 aaPredicted RBP9.43□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF286AQ9HBT8 521 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 COPZ2Q9P299 210 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF222Q9UK12 451 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 ARFGEF3Q5TH69 2177 aa9.43□□□□□ -0.9
LINC00539-203ENST00000434601 DYSFO75923 2080 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms