RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 KPTNQ9Y664 436 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 MYO7BQ6PIF6 2116 aa8.94□□□□□ -0.98
CD44-210ENST00000434472 SDK2Q58EX2 2172 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 A0A1W2PNU3 283 aaPredicted RBP8.93□□□□□ -0.98
CD44-210ENST00000434472 LRP5LA4QPB2 252 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 CLEC18AA5D8T8 446 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 ZNF205O95201 554 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 HEXAP06865 529 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 SFTA3P0C7M3 94 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 PRKACAP17612 351 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 CAMLGP49069 296 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 FOXG1P55316 489 aaPredicted RBP8.93□□□□□ -0.98
CD44-210ENST00000434472 VAMP2P63027 116 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 NUFIP2Q7Z417 695 aaKnown RBP8.93□□□□□ -0.98
CD44-210ENST00000434472 SELENOHQ8IZQ5 122 aaKnown RBP8.93□□□□□ -0.98
CD44-210ENST00000434472 CLEC18CQ8NCF0 446 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 DMBX1Q8NFW5 382 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 SECTM1Q8WVN6 248 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 BCL2L2Q92843 193 aaPredicted RBP8.93□□□□□ -0.98
CD44-210ENST00000434472 KIRREL1Q96J84 757 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 PRELID1Q9Y255 219 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 ZNF175Q9Y473 711 aa8.93□□□□□ -0.98
CD44-210ENST00000434472 ZNF503-AS2A6NEH8 195 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 SLC22A20A6NK97 555 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 J3QT63 122 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 NGFP01138 241 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 WNT2P09544 360 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 CCL2P13500 99 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 UCP1P25874 307 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 MDH2P40926 338 aaKnown RBP8.92□□□□□ -0.98
CD44-210ENST00000434472 UCP2P55851 309 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 EWSR1Q01844 656 aaKnown RBP eCLIP8.92□□□□□ -0.98
CD44-210ENST00000434472 CLN3Q13286 438 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 MRPL49Q13405 166 aaKnown RBP8.92□□□□□ -0.98
CD44-210ENST00000434472 ZNF266Q14584 549 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 FBXW9Q5XUX1 488 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 ZNF880Q6PDB4 577 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 MOB1BQ7L9L4 216 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 FAM58AQ8N1B3 248 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 OR2C3Q8N628 320 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 SUMF2Q8NBJ7 301 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 LFNGQ8NES3 379 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 OR5D13Q8NGL4 314 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 RTL8AQ9BWD3 113 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 C11orf1Q9H5F2 150 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 PLEKHF2Q9H8W4 249 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 WFDC1Q9HC57 220 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 C19orf12Q9NSK7 152 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 PLA2G2EQ9NZK7 142 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 PRELID3BQ9Y3B1 194 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 FAM96BQ9Y3D0 163 aa8.92□□□□□ -0.98
CD44-210ENST00000434472 TNRC6AQ8NDV7 1962 aaKnown RBP8.92□□□□□ -0.98
CD44-210ENST00000434472 NKX2-6A6NCS4 301 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 H0Y980 276 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 PITX3O75364 302 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 TNFSF15O95150 251 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 SCTP09683 121 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 VDAC1P21796 283 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 CD80P33681 288 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 HLA-DRB3P79483 266 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 TBC1D28Q2M2D7 210 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 ZNF818PQ6ZRF7 136 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 Q8IYB0 196 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 GAPTQ8N292 157 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 TMEM178AQ8NBL3 297 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 MRPL30Q8TCC3 161 aaKnown RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 WDYHV1Q96HA8 205 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 BOD1Q96IK1 185 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 CABLES2Q9BTV7 478 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 PBDC1Q9BVG4 233 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 ZNF552Q9H707 407 aaPredicted RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 GLRX2Q9NS18 164 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 CRIM1Q9NZV1 1036 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 CACFD1Q9UGQ2 172 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 PRSS50Q9UI38 385 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 ZDHHC8Q9ULC8 765 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 LHX6Q9UPM6 363 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 TRGV5A0A0B4J1U4 118 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 A0A1B0GW64 132 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 UMAD1C9J7I0 102 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 NPIPB11E5RHQ5 1161 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 CDX4O14627 284 aaPredicted RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 DEGS1O15121 323 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 HSPA12AO43301 675 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 SYNGR1O43759 233 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 SLC25A6P12236 298 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 SNCAP37840 140 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 NPBWR1P48145 328 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 BAXQ07812 192 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 HFEQ30201 348 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 BATF2Q8N1L9 274 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 OR8G5Q8NG78 346 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 BSCL2Q96G97 398 aaPredicted RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 USB1Q9BQ65 265 aaKnown RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 OR51I2Q9H344 312 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 LYRM2Q9NU23 88 aaPredicted RBP8.91□□□□□ -0.98
CD44-210ENST00000434472 TREM2Q9NZC2 230 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 MLXQ9UH92 298 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 IL17BQ9UHF5 180 aa8.91□□□□□ -0.98
CD44-210ENST00000434472 A0A0C4DFX4 3053 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms