RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 CARHSP1Q9Y2V2 147 aaKnown RBP6.39□□□□□ -1.39
COL17A1-204ENST00000433822 STARD10Q9Y365 291 aa6.39□□□□□ -1.39
COL17A1-204ENST00000433822 TMED3Q9Y3Q3 217 aa6.39□□□□□ -1.39
COL17A1-204ENST00000433822 MPC1Q9Y5U8 109 aa6.39□□□□□ -1.39
COL17A1-204ENST00000433822 NOTCH2Q04721 2471 aa6.39□□□□□ -1.39
COL17A1-204ENST00000433822 ITPR3Q14573 2671 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 IGKV1D-8A0A087WSZ0 117 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 KIR2DS1A0A191URI9 304 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 LOC105371267A0A1B0GV96 52 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 C13orf42A0A1B0GVH6 325 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 FAM230AA0A1W2PPH8 454 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 LRP5LA4QPB2 252 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 CLEC18AA5D8T8 446 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PINLYPA6NC86 204 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 E5RGE8 158 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 NPIPB11E5RHQ5 1161 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 KLRC4-KLRK1H3BQV0 150 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 SDCBPO00560 298 aaPredicted RBP6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ADAP1O75689 374 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 CNOT4O95628 575 aaKnown RBP6.38□□□□□ -1.39
COL17A1-204ENST00000433822 CDS2O95674 445 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 NAPSAO96009 420 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 MT-CO3P00414 261 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 FAM157CP0CG43 387 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 MMP9P14780 707 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 GLRA1P23415 457 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 KIR2DS4P43632 304 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 SULT1A2P50226 295 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 BLOC1S1P78537 153 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PLP2Q04941 152 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 RAB32Q13637 225 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 KIR2DS1Q14954 304 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 OR1C1Q15619 314 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 SHEQ5VZ18 495 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 TMEM268Q5VZI3 342 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PLCXD3Q63HM9 321 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 LDLRAD3Q86YD5 345 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ZDHHC23Q8IYP9 409 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 FBXL14Q8N1E6 418 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF611Q8N823 705 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 CLEC18CQ8NCF0 446 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 OR5L1Q8NGL2 311 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 OR51F2Q8NH61 342 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 LYPD6BQ8NI32 183 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 NPRL2Q8WTW4 380 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PCNPQ8WW12 178 aaKnown RBP6.38□□□□□ -1.39
COL17A1-204ENST00000433822 APH1AQ96BI3 265 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 RRNAD1Q96FB5 475 aaKnown RBP6.38□□□□□ -1.39
COL17A1-204ENST00000433822 C18orf12Q96KH6 178 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 OR10C1Q96KK4 312 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 POM121L2Q96KW2 1035 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF75AQ96N20 296 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 DMRTA2Q96SC8 542 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 SPIN2AQ99865 258 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 SPIN2BQ9BPZ2 258 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 TTTY12Q9BZ98 90 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PKIBQ9C010 78 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 TREM2Q9NZC2 230 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 LPAR3Q9UBY5 353 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 FBXO9Q9UK97 447 aaPredicted RBP6.38□□□□□ -1.39
COL17A1-204ENST00000433822 PCDHB10Q9UN67 800 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 ST3GAL6Q9Y274 331 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 NSG2Q9Y328 171 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 FLNCQ14315 2725 aa6.38□□□□□ -1.39
COL17A1-204ENST00000433822 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 TMEM218A2RU14 115 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF850A8MQ14 1090 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 CDX4O14627 284 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ABCD4O14678 606 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 SPRY1O43609 319 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 SP1P08047 785 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ACAA1P09110 424 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 SEC11BP0C7V7 166 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 HKR1P10072 659 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 TUBG1P23258 451 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 IL32P24001 234 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 P2RY1P47900 373 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 RAB5CP51148 216 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 RRADP55042 308 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 PIGPP57054 158 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 HERV-K104P61576 105 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ARF1P84077 181 aaKnown RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 PJVKQ0ZLH3 352 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 IL24Q13007 206 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF273Q14593 569 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 DAZAP2Q15038 168 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 IAH1Q2TAA2 248 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 GGNBP1Q5YKI7 109 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF585AQ6P3V2 769 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 MRPL21Q7Z2W9 205 aaKnown RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 NUFIP2Q7Z417 695 aaKnown RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 ZNF573Q86YE8 665 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 Q8IYB0 196 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 SVBPQ8N300 66 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 TMEM251Q8N6I4 163 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 RELL2Q8NC24 303 aaPredicted RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 CPEB3Q8NE35 698 aaKnown RBP6.37□□□□□ -1.39
COL17A1-204ENST00000433822 FGFBP3Q8TAT2 258 aa6.37□□□□□ -1.39
COL17A1-204ENST00000433822 RTN4IP1Q8WWV3 396 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms