RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 ATP5HO75947 161 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 OR5F1O95221 314 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 SNRPAP09012 282 aaKnown RBP3.59□□□□□ -1.83
USP54-206ENST00000433394 OR4Q2P0C623 313 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 EVI2BP34910 448 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 MPIP34949 423 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 NUDT2P50583 147 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 SLC18A1P54219 525 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 RPL10AP62906 217 aaKnown RBP3.59□□□□□ -1.83
USP54-206ENST00000433394 PMVKQ15126 192 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 PRSS8Q16651 343 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 UNQ9165/PRO28630Q6UXU0 137 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 TMEM239Q8WW34 195 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 HGDQ93099 445 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 ADTRPQ96IZ2 230 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 RILPQ96NA2 401 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 METTL26Q96S19 204 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 C20orf144Q9BQM9 153 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 MARVELD1Q9BSK0 173 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 ACOT13Q9NPJ3 140 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 RAB22AQ9UL26 194 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 AKAP11Q9UKA4 1901 aa3.59□□□□□ -1.83
USP54-206ENST00000433394 KIAA1551Q9HCM1 1747 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 DOCK2Q92608 1830 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 PCM1Q15154 2024 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 CABIN1Q9Y6J0 2220 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 SLC5A10A0PJK1 596 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 KRTAP9-6A8MVA2 160 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 IL3RAP26951 378 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 MYL6P60660 151 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 MAD2L1BPQ15013 274 aaPredicted RBP3.58□□□□□ -1.84
USP54-206ENST00000433394 KLHL12Q53G59 568 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 PTRHD1Q6GMV3 140 aaKnown RBP3.58□□□□□ -1.84
USP54-206ENST00000433394 EPGNQ6UW88 154 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 SETD3Q86TU7 594 aaPredicted RBP3.58□□□□□ -1.84
USP54-206ENST00000433394 CYP4Z1Q86W10 505 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 BBS7Q8IWZ6 715 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 ATPAF2Q8N5M1 289 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 CPNE4Q96A23 557 aaPredicted RBP3.58□□□□□ -1.84
USP54-206ENST00000433394 TMIGD2Q96BF3 282 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 CHMP6Q96FZ7 201 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 TRNT1Q96Q11 434 aaKnown RBP3.58□□□□□ -1.84
USP54-206ENST00000433394 ABCB9Q9NP78 766 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 TREM1Q9NP99 234 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 RBM22Q9NW64 420 aaKnown RBP eCLIP3.58□□□□□ -1.84
USP54-206ENST00000433394 ANXA10Q9UJ72 324 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 MED23Q9ULK4 1368 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 C10orf71Q711Q0 1435 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 ANKRD31Q8N7Z5 1873 aa3.58□□□□□ -1.84
USP54-206ENST00000433394 A0A1B0GW15 77 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 BTNL10A8MVZ5 291 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 C9JQL5 133 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 GOLGA8MH3BSY2 632 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 UPK2O00526 184 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 ZNF189O75820 626 aaPredicted RBP3.57□□□□□ -1.84
USP54-206ENST00000433394 PAX6P26367 422 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 KRTAP5-9P26371 169 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 FKBP1AP62942 108 aaKnown RBP3.57□□□□□ -1.84
USP54-206ENST00000433394 CASP8Q14790 479 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 FBXL19-AS1Q494R0 122 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 LCE3EQ5T5B0 92 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 KDM4DQ6B0I6 523 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 MAST2Q6P0Q8 1798 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 PRSS54Q6PEW0 395 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 DEGS2Q6QHC5 323 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 PDPNQ86YL7 162 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 CCNYL1Q8N7R7 359 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 OR8G5Q8NG78 346 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 S100PBPQ96BU1 408 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 SMIM8Q96KF7 97 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 CYTH2Q99418 400 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 ZSCAN16Q9H4T2 348 aaPredicted RBP3.57□□□□□ -1.84
USP54-206ENST00000433394 UCK1Q9HA47 277 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 C12orf4Q9NQ89 552 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 ZNF835Q9Y2P0 537 aa3.57□□□□□ -1.84
USP54-206ENST00000433394 TNRC6CQ9HCJ0 1690 aaKnown RBP3.56□□□□□ -1.84
USP54-206ENST00000433394 CCDC171Q6TFL3 1326 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 A0A1W2PNU3 283 aaPredicted RBP3.56□□□□□ -1.84
USP54-206ENST00000433394 TMEM72A0PK05 275 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 GOLGA6L10A6NI86 522 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 K7EN84 100 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 hCG_2039718K7EN88 272 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 CDK1P06493 297 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 ZNF286BP0CG31 522 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 MPV17P39210 176 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 GDI2P50395 445 aaKnown RBP3.56□□□□□ -1.84
USP54-206ENST00000433394 XKP51811 444 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 FUT5Q11128 374 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 ALX1Q15699 326 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 TNXAQ16473 311 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 PSG3Q16557 428 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 APOBEC3HQ6NTF7 200 aaKnown RBP3.56□□□□□ -1.84
USP54-206ENST00000433394 TPGS1Q6ZTW0 290 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 FAM231DQ6ZW35 169 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 TMEM105Q8N8V8 129 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 C22orf15Q8WYQ4 148 aa3.56□□□□□ -1.84
USP54-206ENST00000433394 ESR2Q92731 530 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms