RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 CEP295Q9C0D2 2601 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A10PA6NDY2 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A18PA6NE21 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A16PA6NEW6 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A20PA6NIJ5 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A8PA6NJQ4 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A7PA6NKC0 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A22PA8MWA6 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A12PA8MX19 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A5PA8MXJ8 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A23PA8MXZ1 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A15PP0C7V4 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A13PP0C7W8 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A14PP0C7W9 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM90A24PP0C7X0 464 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM157CP0CG43 387 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 TPT1P13693 172 aaKnown RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 PMELP40967 661 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 SLC35G3Q8N808 338 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 AMDHD2Q9Y303 409 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 HOXD4P09016 255 aaPredicted RBP12.46□□□□□ -0.41
RFTN1-203ENST00000432519 UBE2NP61088 152 aaKnown RBP12.46□□□□□ -0.41
RFTN1-203ENST00000432519 PSG7Q13046 419 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 MPV17LQ2QL34 196 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 PCSK4Q6UW60 755 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 Q6ZT83 130 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 ZNF573Q86YE8 665 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 GAPTQ8N292 157 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
RFTN1-203ENST00000432519 DLL3Q9NYJ7 618 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 DKK4Q9UBT3 224 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 NUP50Q9UKX7 468 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 FZR1Q9UM11 496 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 CDIPTO14735 213 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 MPPED1O15442 326 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 FGF16O43320 207 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 TNFSF12O43508 249 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 IFNA21P01568 189 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 RPL12P30050 165 aaKnown RBP12.46□□□□□ -0.41
RFTN1-203ENST00000432519 UCP3P55916 312 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 IL24Q13007 206 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 ZNF154Q13106 437 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 FBXW12Q6X9E4 464 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 CXorf67Q86X51 503 aaPredicted RBP12.46□□□□□ -0.41
RFTN1-203ENST00000432519 SCCPDHQ8NBX0 429 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 OPA3Q9H6K4 179 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 CCL28Q9NRJ3 127 aa12.46□□□□□ -0.41
RFTN1-203ENST00000432519 APC2O95996 2303 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 ACACAQ13085 2346 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TRAV17A0A0B4J275 112 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 OR5B21A6NL26 309 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 HSD17B6O14756 317 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TFF1P04155 84 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 ZNF44P15621 663 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SPIN3Q5JUX0 258 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TBC1D26Q86UD7 250 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 WDR31Q8NA23 367 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 OR1J1Q8NGS3 322 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 PRRX2Q99811 253 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 PLSCR2Q9NRY7 297 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 LUZP4Q9P127 313 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 FBXL17Q9UF56 701 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 C3orf85A0A1B0GTC6 90 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 K7EM74 188 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 K7EPK0 472 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 UCP2P55851 309 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TMEM33P57088 247 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 Q6P435 159 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 Q6ZS49 121 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 FAM71E2Q8N5Q1 922 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SPERTQ8NA61 448 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 PRSS33Q8NF86 280 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 BPIFCQ8NFQ6 507 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 WNT2BQ93097 391 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 MEMO1Q9Y316 297 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SESN1Q9Y6P5 492 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TRDCB7Z8K6 153 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 H7C1Q1 480 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SIRPB1O00241 398 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 NAAAQ02083 359 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 MST1LQ2TV78 715 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 ZNF826PQ6ZT77 177 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 RPRMLQ8N4K4 120 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 LRTM2Q8N967 370 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 PLPPR1Q8TBJ4 325 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 SUCNR1Q9BXA5 334 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 CDH20Q9HBT6 801 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TMEM100Q9NV29 134 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 DNAJB11Q9UBS4 358 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 TINAGQ9UJW2 476 aa12.45□□□□□ -0.42
RFTN1-203ENST00000432519 RELNP78509 3460 aa12.44□□□□□ -0.42
RFTN1-203ENST00000432519 NUPL2O15504 423 aaKnown RBP12.44□□□□□ -0.42
RFTN1-203ENST00000432519 FBXO24O75426 580 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms