RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 FAM189A1O60320 539 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 EEDO75530 441 aaKnown RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 IFNA10P01566 189 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 IFNGP01579 166 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CD8AP01732 235 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 C1QCP02747 245 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ARG1P05089 322 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CYBAP13498 195 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 COX5AP20674 150 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CA5AP35218 305 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PHBP35232 272 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SERPINB10P48595 397 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FBXW4P57775 412 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CDC42P60953 191 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CKS1BP61024 79 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 RAP1BP61224 184 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SLC7A9P82251 487 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 RUNX1Q01196 453 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 IFITM2Q01629 132 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SP4Q02446 784 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FMODQ06828 376 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SMAGPQ0VAQ4 97 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ST3GAL4Q11206 333 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 TWF1Q12792 350 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 OR5I1Q13606 314 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ZNF726P1Q15940 193 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 C1orf195Q5TG92 126 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FAM78BQ5VT40 261 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SLC16A13Q7RTY0 426 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PRSS41Q7RTY9 318 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CA13Q8N1Q1 262 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ZADH2Q8N4Q0 377 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 TMEM86BQ8N661 226 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 OR4M2Q8NGB6 313 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 OR13G1Q8NGZ3 307 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 OR5J2Q8NH18 312 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 OR10A6Q8NH74 314 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 GNPDA2Q8TDQ7 276 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 DNAJC9Q8WXX5 260 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ZMYND19Q96E35 227 aaPredicted RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 SEH1LQ96EE3 360 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 IMP4Q96G21 291 aaKnown RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 PDXPQ96GD0 296 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SORT1Q99523 831 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 CCDC32Q9BV29 185 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 TAPBPLQ9BX59 468 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 MS4A8Q9BY19 250 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 PLA2G2FQ9BZM2 168 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 RBKSQ9H477 322 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 ZNF385DQ9H6B1 395 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 REEP4Q9H6H4 257 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 SLC25A22Q9H936 323 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 NMNAT1Q9HAN9 279 aaPredicted RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 TPT1P8Q9HAU6 139 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 BIN3Q9NQY0 253 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 FBXO6Q9NRD1 293 aaPredicted RBP1.9□□□□□ -2.1
CLK1-204ENST00000432425 OPTCQ9UBM4 332 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 VPS29Q9UBQ0 182 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 HSPB11Q9Y547 144 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 AKAP12Q02952 1782 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 MYH11P35749 1972 aa1.9□□□□□ -2.1
CLK1-204ENST00000432425 MYH7P12883 1935 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 AKAP11Q9UKA4 1901 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 CCDC180Q9P1Z9 1646 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RB1CC1Q8TDY2 1594 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 BAZ2AQ9UIF9 1905 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 EXOC1LA0A1B0GW35 172 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 A0A1B0GWB2 263 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 DAPL1A0PJW8 107 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 C5orf58C9J3I9 102 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 LOC110117498-PIK3R3F6TDL0 507 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SULT2B1O00204 365 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 CCL21O00585 134 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 MFNGO00587 321 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 GABRPO00591 440 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 CYB5BO43169 146 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 ZNF207O43670 478 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 SYNGR1O43759 233 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 MFSD11O43934 449 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SULT1C4O75897 302 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 OR2B3O76000 313 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 SLC22A5O76082 557 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 LALBAP00709 142 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 PDYNP01213 254 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 IGHV2-5P01817 119 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 REG1AP05451 166 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 IGKV5-2P06315 115 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 BPGMP07738 259 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 OR56A5P0C7T3 313 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 HTR1DP28221 377 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 LOXP28300 417 aaPredicted RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 FMO3P31513 532 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 FOXN2P32314 431 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 YAP1P46937 504 aaKnown RBP1.9□□□□□ -2.11
CLK1-204ENST00000432425 LGALS7P47929 136 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 PSMD8P48556 350 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RBP2P50120 134 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 CDKN2DP55273 166 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 RAB25P57735 213 aa1.9□□□□□ -2.11
CLK1-204ENST00000432425 TPI1P60174 286 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms