RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ERVS71-1P61550 626 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 KIR2DS1Q14954 304 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 DEFB109BQ30KR1 87 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 ACSF3Q4G176 576 aaPredicted RBP11.87□□□□□ -0.51
HOXC4-202ENST00000430889 VWA1Q6PCB0 445 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 GAPTQ8N292 157 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 C17orf78Q8N4C9 275 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 FAM71E2Q8N5Q1 922 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 PRSS33Q8NF86 280 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 SARAFQ96BY9 339 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 TAAR6Q96RI8 345 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 PRRX2Q99811 253 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 CABLES2Q9BTV7 478 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 RTL8AQ9BWD3 113 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 OR2J1Q9GZK6 312 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 CDH20Q9HBT6 801 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 DLL3Q9NYJ7 618 aa11.87□□□□□ -0.51
HOXC4-202ENST00000430889 EP300Q09472 2414 aaPredicted RBP11.86□□□□□ -0.51
HOXC4-202ENST00000430889 DMXL1Q9Y485 3027 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 A0A1W2PR80 420 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 C3orf80F5H4A9 247 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 CTXN2P0C2S0 81 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 SPINK2P20155 84 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
HOXC4-202ENST00000430889 RTP5Q14D33 572 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 ALKBH6Q3KRA9 238 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 SHEQ5VZ18 495 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 OR2A2Q6IF42 318 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF585AQ6P3V2 769 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 STPG2Q8N412 459 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 SLC25A40Q8TBP6 338 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 TMEM56Q96MV1 263 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 USB1Q9BQ65 265 aaKnown RBP11.86□□□□□ -0.51
HOXC4-202ENST00000430889 C11orf1Q9H5F2 150 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 PLSCR4Q9NRQ2 329 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 DKK4Q9UBT3 224 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 TMEM56-RWDD3S4R434 201 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 LOC400499M0QZD8 3231 aa11.86□□□□□ -0.51
HOXC4-202ENST00000430889 NPIPB11E5RHQ5 1161 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 DIRAS3O95661 229 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 CGAP01215 116 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 TK1P04183 234 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 GAPDHP04406 335 aaKnown RBP11.85□□□□□ -0.51
HOXC4-202ENST00000430889 HOXD4P09016 255 aaPredicted RBP11.85□□□□□ -0.51
HOXC4-202ENST00000430889 ACAA1P09110 424 aaPredicted RBP11.85□□□□□ -0.51
HOXC4-202ENST00000430889 PGA5P0DJD9 388 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 RPL12P30050 165 aaKnown RBP11.85□□□□□ -0.51
HOXC4-202ENST00000430889 UCP2P55851 309 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 MST1LQ2TV78 715 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 IGFL3Q6UXB1 125 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 SCCPDHQ8NBX0 429 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 OR4D5Q8NGN0 318 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 OR1S2Q8NGQ3 325 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 NRIP2Q9BQI9 281 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 TMEM222Q9H0R3 208 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 TREM2Q9NZC2 230 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 ZDHHC8Q9ULC8 765 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 PCDHB10Q9UN67 800 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
HOXC4-202ENST00000430889 ZFHX4Q86UP3 3567 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 C3orf85A0A1B0GTC6 90 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 AHRRA9YTQ3 701 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 C1QTNF9BB2RNN3 333 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 B8ZZF3 427 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 GPR31O00270 319 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 HSPB6O14558 160 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 PHF1O43189 567 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 TNFSF13O75888 250 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 IGLV1-44P01699 117 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 SRPXP78539 464 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 FOXF2Q12947 444 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 PSG7Q13046 419 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF154Q13106 437 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF324BQ6AW86 544 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 RPL7L1Q6DKI1 246 aaKnown RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF818PQ6ZRF7 136 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 Q8IYB0 196 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 OR5T2Q8NGG2 359 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 OR4A4PQ8NGN8 299 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 SUN5Q8TC36 379 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 TMED6Q8WW62 240 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ARV1Q9H2C2 271 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 PIGMQ9H3S5 423 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 PLEKHA2Q9HB19 425 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 INTS1Q8N201 2190 aaKnown RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 FRYQ5TBA9 3013 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 RAB19A4D1S5 217 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ZSCAN5BA6NJL1 495 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 BET1O15155 118 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 WNT2P09544 360 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 SELEP16581 610 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 MPV17P39210 176 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 ZNF146Q15072 292 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 SEM1Q6ZVN7 128 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 TBC1D26Q86UD7 250 aa11.84□□□□□ -0.51
HOXC4-202ENST00000430889 H1FOOQ8IZA3 346 aaPredicted RBP11.84□□□□□ -0.51
HOXC4-202ENST00000430889 SLC35G3Q8N808 338 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms