RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SNX10Q9Y5X0 201 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 WSB1Q9Y6I7 421 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ENPP4Q9Y6X5 453 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 ADGRL3Q9HAR2 1447 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 RIMS2Q9UQ26 1411 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 CDC42BPBQ9Y5S2 1711 aa1.88□□□□□ -2.11
HMGB1P9-201ENST00000429856 CABIN1Q9Y6J0 2220 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CARMIL3Q8ND23 1372 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 COL4A4P53420 1690 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 TGIF2-C20orf24A0A0A6YYL0 155 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 TRAV8-2A0A0B4J237 113 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR5H1A6NKK0 313 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 TMX2-CTNND1H3BSU7 103 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 I3L4J1 428 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 KCNK1O00180 336 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 UPK1AO00322 258 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 STX10O60499 249 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 PDCD6O75340 191 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CNMDO75829 334 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 DCTN3O75935 186 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC25A14O95258 325 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 HLA-DRAP01903 254 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 MT-ND4P03905 459 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 PSG2P11465 335 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CD99P14209 185 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ATF1P18846 271 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 PRPS1L1P21108 318 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 IL3RAP26951 378 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 IDH3GP51553 393 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC18A1P54219 525 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CCL23P55773 120 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 C1QTNF8P60827 252 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ARF6P62330 175 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 POLR2GP62487 172 aaKnown RBP eCLIP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 GRB2P62993 217 aaKnown RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 FMODQ06828 376 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 PPIDQ08752 370 aaKnown RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ADIGQ0VDE8 80 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SRSF6Q13247 344 aaKnown RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 EIF4EBP2Q13542 120 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 C16orf72Q14CZ0 275 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 FBXL19-AS1Q494R0 122 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF658BQ4V348 819 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 FAM78AQ5JUQ0 283 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 FAM162BQ5T6X4 162 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SPOPLQ6IQ16 392 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 Q6ZSR6 202 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 MTERF4Q7Z6M4 381 aaKnown RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CALHM1Q8IU99 346 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 UBALD2Q8IYN6 164 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 MUC15Q8N387 334 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR2M7Q8NG81 312 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 GPR32P1Q8NGA4 272 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR4M1Q8NGD0 313 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR4P4Q8NGL7 312 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 COQ8AQ8NI60 647 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC37A2Q8TED4 501 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ASB13Q8WXK3 278 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 FXYD5Q96DB9 178 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 DOK1Q99704 481 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 SLC25A31Q9H0C2 315 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 ASB7Q9H672 318 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 VSIRQ9H7M9 311 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 XPNPEP1Q9NQW7 623 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 OPN4Q9UHM6 478 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 EVC2Q86UK5 1308 aa1.87□□□□□ -2.11
HMGB1P9-201ENST00000429856 TRIOBPQ9H2D6 2365 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 NPHP4O75161 1426 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGLV1-50A0A075B6I6 118 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 LOC389332A0A1B0GUA5 103 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 FAM183AA6NL82 134 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 BTNL10A8MVZ5 291 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 EVPLLA8MZ36 301 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 UPK2O00526 184 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 MFNGO00587 321 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 YIF1AO95070 293 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 CA2P00918 260 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 APCSP02743 223 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 AKR1C4P17516 323 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 MDKP21741 143 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 RCVRNP35243 200 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 CD79BP40259 229 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 OMPP47874 163 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 ERFP50548 548 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 OR4D2P58180 307 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 PFN3P60673 137 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 ELF3P78545 371 aaPredicted RBP1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 TMED2Q15363 201 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 MPPED2Q15777 294 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 SNCBQ16143 134 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 LRRC75BQ2VPJ9 315 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 ZNF404Q494X3 552 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 AKIRIN2Q53H80 203 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 SPIN3Q5JUX0 258 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 GALNT10Q86SR1 603 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 WDR86Q86TI4 376 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 MDP1Q86V88 176 aa1.86□□□□□ -2.11
HMGB1P9-201ENST00000429856 COMMD7Q86VX2 200 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms