RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 DDAH2O95865 285 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 TSPAN7P41732 249 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 CLRN1P58418 232 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 C1orf61Q13536 156 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 ZNF726P1Q15940 193 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 HLA-DQA1Q5Y7H0 255 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 UEVLDQ8IX04 471 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 ZNF100Q8IYN0 542 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 ZNF721Q8TF20 911 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 Q96M66 194 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 CHST11Q9NPF2 352 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 PNRC2Q9NPJ4 139 aaKnown RBP9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 V9GYS6 101 aa9.6□□□□□ -0.87
SEMA4D-209ENST00000429836 C3orf85A0A1B0GTC6 90 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 F5H5K5 113 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 CHST1O43916 411 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 APODP05090 189 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TFPI2P48307 235 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TAS2R30P59541 319 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TMEM267Q0VDI3 215 aaPredicted RBP9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 SMAD4Q13485 552 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TDRG1Q3Y452 100 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TMEM170AQ8WVE7 144 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 RPUSD4Q96CM3 377 aaKnown RBP9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 SMIM7Q9BQ49 75 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 UBE2J1Q9Y385 318 aaPredicted RBP9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 KIR2DL5BA0A0G2JN68 375 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 KIR2DL5BA0A0G2JPC4 375 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 CEACAM1P13688 526 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 CCL1P22362 96 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 PDLIM4P50479 330 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 EFNA3P52797 238 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 RUNX3Q13761 415 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 ZNF573Q86YE8 665 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 ZNF695Q8IW36 515 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 KIR2DL5AQ8N109 375 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 BATF2Q8N1L9 274 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TMEM256Q8N2U0 113 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 OR51G1Q8NGK1 321 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 SDSLQ96GA7 329 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 TBX15Q96SF7 602 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 CTDSP1Q9GZU7 261 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 RBKSQ9H477 322 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 LPAR2Q9HBW0 351 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 SERINC1Q9NRX5 453 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 NAGKQ9UJ70 344 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 PIGLQ9Y2B2 252 aa9.59□□□□□ -0.87
SEMA4D-209ENST00000429836 VPS13AQ96RL7 3174 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 CCDC85CA6NKD9 419 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 H7BYZ3 331 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 TCF21O43680 179 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 NUPR1O60356 82 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 HPRT1P00492 218 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 IGKV3-11P04433 115 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 EN2P19622 333 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 ZP4Q12836 540 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 CALHM1Q8IU99 346 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 ATP5SQ99766 215 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 PYGO2Q9BRQ0 406 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 WWTR1Q9GZV5 400 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 PRSS50Q9UI38 385 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 LRRC3CA6NJW4 275 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 TP53I11O14683 189 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 MPPED1O15442 326 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 OR2J2O76002 312 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 CDS2O95674 445 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 ZNF133P52736 654 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 FOXL2P58012 376 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 HERV-K104P61576 105 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 GAGE1Q13065 139 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 PIGYQ3MUY2 71 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 SPIN3Q5JUX0 258 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 H1FOOQ8IZA3 346 aaPredicted RBP9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 GBGT1Q8N5D6 347 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 OR5T1Q8NG75 326 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 B3GAT1Q9P2W7 334 aa9.58□□□□□ -0.88
SEMA4D-209ENST00000429836 HNRNPA1P09651 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 LINC00614P0C842 121 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 OR5I1Q13606 314 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 EXT1Q16394 746 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 CST9LP1Q5W188 147 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 Q6ZPA2 131 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 MOB3AQ96BX8 217 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 OR5B12Q96R08 314 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 MRPL13Q9BYD1 178 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 A0A1W2PQD3 144 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 HMGB3O15347 200 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 LCATP04180 440 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 COL9A1P20849 921 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 CCKARP32238 428 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 MTCP1P56278 107 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 HHEXQ03014 270 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 BSXQ3C1V8 233 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 TBC1D26Q86UD7 250 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 SELENOHQ8IZQ5 122 aaKnown RBP9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 CCDC71LQ8N9Z2 235 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 IL22RA2Q969J5 263 aa9.57□□□□□ -0.88
SEMA4D-209ENST00000429836 ANGPTL4Q9BY76 406 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms