RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 METTL11BQ5VVY1 283 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 GAPTQ8N292 157 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 ZNF565Q8N9K5 539 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 LPAR5Q9H1C0 372 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 RNF167Q9H6Y7 350 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 LINC00574Q9H8X3 128 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 LIN7BQ9HAP6 207 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 C19orf12Q9NSK7 152 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 TAS2R3Q9NYW6 316 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 HSF4Q9ULV5 492 aa12.31□□□□□ -0.44
GARNL3-204ENST00000429629 YLPM1P49750 1951 aaKnown RBP12.3□□□□□ -0.44
GARNL3-204ENST00000429629 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ODAMA1E959 279 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 C17orf98A8MV24 154 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 TOX4O94842 621 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ZNF728P0DKX0 622 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 GZMHP20718 246 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 RPS19P39019 145 aaKnown RBP12.3□□□□□ -0.44
GARNL3-204ENST00000429629 EDDM3BP56851 147 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ARF6P62330 175 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 KRBOX4Q5JUW0 171 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 SIGIRRQ6IA17 410 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 OR10K2Q6IF99 312 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 RAB12Q6IQ22 244 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 C11orf42Q8N5U0 333 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 OR56B1Q8NGI3 324 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 RAB2BQ8WUD1 216 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 FAM46BQ96A09 425 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 SLC25A46Q96AG3 418 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 KCTD12Q96CX2 325 aaKnown RBP12.3□□□□□ -0.44
GARNL3-204ENST00000429629 COQ2Q96H96 371 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 CHST6Q9GZX3 395 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 PPA2Q9H2U2 334 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ABRACLQ9P1F3 81 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 PEX16Q9Y5Y5 336 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ETV7Q9Y603 341 aa12.3□□□□□ -0.44
GARNL3-204ENST00000429629 ANK3Q12955 4377 aaKnown RBP12.3□□□□□ -0.44
GARNL3-204ENST00000429629 TRGV10A0A0A0MS01 117 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 TMEM272A0A1B0GTI8 110 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 METTL21EPA6NDL7 271 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
GARNL3-204ENST00000429629 SCGNO76038 276 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 FAM157CP0CG43 387 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 CGB3P0DN86 165 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 CGB7P0DN87 165 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 CHATP28329 748 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 DLX6P56179 175 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 CLDN12P56749 244 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 AESQ08117 197 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 ARL6IP1Q15041 203 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 ATAD3CQ5T2N8 411 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 GPR107Q5VW38 600 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 RSBN1Q5VWQ0 802 aaPredicted RBP12.29□□□□□ -0.44
GARNL3-204ENST00000429629 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 C9orf139Q6ZV77 190 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 Q71RC1 249 aaPredicted RBP12.29□□□□□ -0.44
GARNL3-204ENST00000429629 ZNF554Q86TJ5 538 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 FAM185AQ8N0U4 392 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 Q8N7P7 452 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 OR4M1Q8NGD0 313 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 RIMS4Q9H426 269 aaPredicted RBP12.29□□□□□ -0.44
GARNL3-204ENST00000429629 DAPK2Q9UIK4 370 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 ABCA2Q9BZC7 2435 aa12.29□□□□□ -0.44
GARNL3-204ENST00000429629 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
GARNL3-204ENST00000429629 TMEM30CPA0ZSE6 113 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 MT-ND4P03905 459 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 CLEC2LP0C7M8 214 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 GLIPR1P48060 266 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 MXD1Q05195 221 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 TUSC1Q2TAM9 212 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 ZNF497Q6ZNH5 498 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 USP43Q70EL4 1123 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 BPIFB2Q8N4F0 458 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 TNFRSF14Q92956 283 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 ZNF714Q96N38 554 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 TBX15Q96SF7 602 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 NUP50Q9UKX7 468 aa12.28□□□□□ -0.44
GARNL3-204ENST00000429629 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 A6NJ64 397 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 ZNF729A6NN14 1252 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-204ENST00000429629 SLC2A2P11168 524 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-204ENST00000429629 SRD5A1P18405 259 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 BLVRBP30043 206 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-204ENST00000429629 SRP14P37108 136 aaKnown RBP12.27□□□□□ -0.45
GARNL3-204ENST00000429629 TMEM50BP56557 158 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 ERVFRD-1P60508 538 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 VBP1P61758 197 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 NCS1P62166 190 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 LSM3P62310 102 aaKnown RBP12.27□□□□□ -0.45
GARNL3-204ENST00000429629 GUCA2AQ02747 115 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 EDDM3AQ14507 147 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 ZNF273Q14593 569 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 HEPN1Q6WQI6 88 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 TCF23Q7RTU1 214 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 OR10A7Q8NGE5 316 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 ACOT12Q8WYK0 555 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 CMTM3Q96MX0 182 aa12.27□□□□□ -0.45
GARNL3-204ENST00000429629 GAL3ST2Q9H3Q3 398 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms