RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 GPR157Q5UAW9 335 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 RPL7L1Q6DKI1 246 aaKnown RBP11.7□□□□□ -0.54
THBS3-202ENST00000428962 TMPRSS7Q7RTY8 843 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 FAM219AQ8IW50 185 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 Q8IYB0 196 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 SUMF2Q8NBJ7 301 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 SPIN2AQ99865 258 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 SPIN2BQ9BPZ2 258 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 FBXL17Q9UF56 701 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 DUXBA0A1W2PPF3 345 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 ST8SIA3O43173 380 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 GPR137BO60478 399 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 CDS2O95674 445 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 FAM157CP0CG43 387 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 ZNF14P17017 642 aaPredicted RBP11.7□□□□□ -0.54
THBS3-202ENST00000428962 S100GP29377 79 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 P2RY1P47900 373 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 SPIN3Q5JUX0 258 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 TMEM268Q5VZI3 342 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 OR2T2Q6IF00 324 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 OR2A2Q6IF42 318 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 LDLRAD3Q86YD5 345 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 DEFB124Q8NES8 71 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 TMEM222Q9H0R3 208 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 OR51B6Q9H340 312 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 OR51I2Q9H344 312 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 IL36RNQ9UBH0 155 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 POLDIP2Q9Y2S7 368 aa11.7□□□□□ -0.54
THBS3-202ENST00000428962 UBE2J1Q9Y385 318 aaPredicted RBP11.7□□□□□ -0.54
THBS3-202ENST00000428962 ZNF407Q9C0G0 2248 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 BORCS7-ASMTA0A0B4J1R7 106 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 LRP5LA4QPB2 252 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 HSPB6O14558 160 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 TUSC2O75896 110 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 CNOT4O95628 575 aaKnown RBP11.69□□□□□ -0.54
THBS3-202ENST00000428962 HOXB1P14653 301 aaPredicted RBP11.69□□□□□ -0.54
THBS3-202ENST00000428962 SELEP16581 610 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 CA6P23280 308 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 GNRHRP30968 328 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 MDH2P40926 338 aaKnown RBP11.69□□□□□ -0.54
THBS3-202ENST00000428962 TMEM33P57088 247 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 PMP22Q01453 160 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 MEX3BQ6ZN04 569 aaKnown RBP11.69□□□□□ -0.54
THBS3-202ENST00000428962 TBC1D26Q86UD7 250 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 VASH2Q86V25 355 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 CMTM1Q8IZ96 169 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 SLC35G3Q8N808 338 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 SECTM1Q8WVN6 248 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 LRRC46Q96FV0 321 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 SMIM8Q96KF7 97 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 TP53RKQ96S44 253 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 POMT1Q9Y6A1 747 aa11.69□□□□□ -0.54
THBS3-202ENST00000428962 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 TRAV17A0A0B4J275 112 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 SMPD2O60906 423 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 SCTP09683 121 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 IL32P24001 234 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 KCNJ3P48549 501 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 SULT1A2P50226 295 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 CCL11P51671 97 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 PPP1CBP62140 327 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 DEFA5Q01523 94 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 GNMTQ14749 295 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 TSC22D1Q15714 1073 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 INO80CQ6PI98 192 aaPredicted RBP11.68□□□□□ -0.54
THBS3-202ENST00000428962 IGFL2Q6UWQ7 119 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 MOB1BQ7L9L4 216 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 ZNF695Q8IW36 515 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 UBAC2Q8NBM4 344 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 OR4A4PQ8NGN8 299 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 MRPL30Q8TCC3 161 aaKnown RBP11.68□□□□□ -0.54
THBS3-202ENST00000428962 ABHD14BQ96IU4 210 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 TMEM56Q96MV1 263 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 MS4A7Q9GZW8 240 aaPredicted RBP11.68□□□□□ -0.54
THBS3-202ENST00000428962 TMEM56-RWDD3S4R434 201 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 DNAJC13O75165 2243 aa11.68□□□□□ -0.54
THBS3-202ENST00000428962 TMEM218A2RU14 115 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 AQP7O14520 342 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 DEGS1O15121 323 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 NKX2-8O15522 239 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 LILRA1O75019 489 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 MED6O75586 246 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 CEACAM1P13688 526 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 IGHV1-2P23083 117 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 HOXC12P31275 282 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 NOVA1P51513 510 aaKnown RBP11.67□□□□□ -0.54
THBS3-202ENST00000428962 HLA-DRB3P79483 266 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 PJVKQ0ZLH3 352 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 GABRA6Q16445 453 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 SPATA46Q5T0L3 261 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 Q6ZT83 130 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 BOLLQ8N9W6 283 aaKnown RBP11.67□□□□□ -0.54
THBS3-202ENST00000428962 FDCSPQ8NFU4 85 aa11.67□□□□□ -0.54
THBS3-202ENST00000428962 OR4D5Q8NGN0 318 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms