RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ST6GALNAC5Q9BVH7 336 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 EGLN1Q9GZT9 426 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 SHARPINQ9H0F6 387 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 MS4A5Q9H3V2 200 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 PLEKHF2Q9H8W4 249 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 TMEM106BQ9NUM4 274 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 ETAA1Q9NY74 926 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 DNAJB11Q9UBS4 358 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 MAB21L2Q9Y586 359 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 TACC2O95359 2948 aa7.42□□□□□ -1.22
SMC6-204ENST00000428868 CELSR2Q9HCU4 2923 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 A0A0B4J293 547 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 IGHV1-69-2A0A0G2JMI3 117 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 OOEPA6NGQ2 149 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 MCRIP1C9JLW8 97 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 SDCBPO00560 298 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 RAB3DO95716 219 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 ECDO95905 644 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 CD74P04233 296 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 AKAIN1P0CW23 69 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 RCC1P18754 421 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 LMO1P25800 156 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 PRDX2P32119 198 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 TAS2R19P59542 299 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 TLE4Q04727 773 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 SSBP1Q04837 148 aaKnown RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 ZMYND11Q15326 602 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 RSBN1Q5VWQ0 802 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 TEX36Q5VZQ5 186 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 SP5Q6BEB4 398 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 FIP1L1Q6UN15 594 aaKnown RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 LYPD2Q6UXB3 125 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 ZNF295-AS1Q8N0V1 137 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 ASCC1Q8N9N2 400 aaKnown RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 ZNRF1Q8ND25 227 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 BEST4Q8NFU0 473 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 ENKURQ8TC29 256 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 CCDC107Q8WV48 283 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 ERGIC1Q969X5 290 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 MRGPRFQ96AM1 343 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 POM121Q96HA1 1249 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 CCL13Q99616 98 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 DCTN5Q9BTE1 182 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 LIME1Q9H400 295 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 TMEM165Q9HC07 324 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 CHMP1AQ9HD42 196 aaPredicted RBP7.41□□□□□ -1.22
SMC6-204ENST00000428868 MCUBQ9NWR8 336 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 RASL12Q9NYN1 266 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 FLVCR2Q9UPI3 526 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 PLEKHA6Q9Y2H5 1048 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 NPTNQ9Y639 398 aa7.41□□□□□ -1.22
SMC6-204ENST00000428868 MYO9AB2RTY4 2548 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 USP9YO00507 2555 aaPredicted RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 TEP1Q99973 2627 aaKnown RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 TRAV6A0A075B6T7 132 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 PPIAL4EA0A075B759 164 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 FAM240BA0A1B0GVZ2 78 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 ZNF736B4DX44 427 aaPredicted RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 PPIAL4DF5H284 164 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 LGALS8O00214 317 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 TNFRSF13BO14836 293 aaPredicted RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 AMY2AP04746 511 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 GSTT2P0CG29 244 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 GSTT2BP0CG30 244 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 PPIAL4FP0DN26 164 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 IRF2P14316 349 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 COX6B1P14854 86 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 DTYMKP23919 212 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 SLC6A1P30531 599 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 CBX5P45973 191 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 AESQ08117 197 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 HERPUD1Q15011 391 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 ARL6IP1Q15041 203 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 AVPI1Q5T686 147 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 SHEQ5VZ18 495 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 FAM53AQ6NSI3 398 aaPredicted RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 ZNF880Q6PDB4 577 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 ZNF497Q6ZNH5 498 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 ZNF788Q6ZQV5 615 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 GAPTQ8N292 157 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 OR51S1Q8NGJ8 323 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 OR13C8Q8NGS7 320 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 PSMG3-AS1Q96PY0 264 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 CLEC4MQ9H2X3 399 aaPredicted RBP7.4□□□□□ -1.22
SMC6-204ENST00000428868 SPACA1Q9HBV2 294 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 Q9N2K0 584 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 C12orf4Q9NQ89 552 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 FAIMQ9NVQ4 179 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 CTSZQ9UBR2 303 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 KIF25Q9UIL4 384 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 PPIAL4AQ9Y536 164 aa7.4□□□□□ -1.22
SMC6-204ENST00000428868 CR1P17927 2039 aa7.4□□□□□ -1.23
SMC6-204ENST00000428868 NOTCH2Q04721 2471 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 ARID1AO14497 2285 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 IGKV1-6A0A0C4DH72 117 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 IFNL4K9M1U5 179 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 TCRBP04435 133 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 SCTP09683 121 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 GLIPR1P48060 266 aa7.39□□□□□ -1.23
SMC6-204ENST00000428868 RAB25P57735 213 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms