RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 DACT3Q96B18 629 aaPredicted RBP11.98□□□□□ -0.49
SGCE-204ENST00000428696 TBX15Q96SF7 602 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 URM1Q9BTM9 101 aaKnown RBP11.98□□□□□ -0.49
SGCE-204ENST00000428696 LIN7BQ9HAP6 207 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 SPACA1Q9HBV2 294 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 KIF25Q9UIL4 384 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 KPTNQ9Y664 436 aa11.98□□□□□ -0.49
SGCE-204ENST00000428696 FN1P02751 2386 aaKnown RBP11.98□□□□□ -0.49
SGCE-204ENST00000428696 TRAV39A0A0B4J263 110 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 TFAP2AP05549 437 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 FUT3P21217 361 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 EPHA1P21709 976 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 FPR2P25090 351 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 BLVRBP30043 206 aaPredicted RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 VBP1P61758 197 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 RPS27AP62979 156 aaKnown RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 MEF2CQ06413 473 aaPredicted RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 UNC119Q13432 240 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 RBM39Q14498 530 aaKnown RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 BRD3OSQ6XYD6 125 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 ZNF782Q6ZMW2 699 aaPredicted RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 NR2C2APQ86WQ0 139 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 UPRTQ96BW1 309 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 Q96M66 194 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 NICN1Q9BSH3 213 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 SIRPDQ9H106 197 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
SGCE-204ENST00000428696 ETAA1Q9NY74 926 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 SCOCQ9UIL1 159 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 NUP50Q9UKX7 468 aa11.97□□□□□ -0.49
SGCE-204ENST00000428696 ODAMA1E959 279 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 M0R1W7 72 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 AIPO00170 330 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 ZNF728P0DKX0 622 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 CD37P11049 281 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 COX7A1P24310 79 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 GLP1RP43220 463 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 SERPINB10P48595 397 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 VEGFCP49767 419 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 NCS1P62166 190 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 KLRD1Q13241 179 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 LTC4SQ16873 150 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 KLF17Q5JT82 389 aaPredicted RBP11.96□□□□□ -0.49
SGCE-204ENST00000428696 OR2W3Q7Z3T1 314 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 Q8N7P7 452 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 ZNF565Q8N9K5 539 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 PLPPR1Q8TBJ4 325 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 COQ2Q96H96 371 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 ZNF714Q96N38 554 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 FAAP24Q9BTP7 215 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 ATG5Q9H1Y0 275 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 PLEKHJ1Q9NW61 149 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 RAB22AQ9UL26 194 aa11.96□□□□□ -0.49
SGCE-204ENST00000428696 ANK3Q12955 4377 aaKnown RBP11.96□□□□□ -0.5
SGCE-204ENST00000428696 TMEM272A0A1B0GTI8 110 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 TMEM14DPA8MWL7 114 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 H3BUI4 141 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 SOCS1O15524 211 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 PDCD6O75340 191 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 SNRPBP14678 240 aaKnown RBP11.95□□□□□ -0.5
SGCE-204ENST00000428696 MMP9P14780 707 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 ERP29P30040 261 aaKnown RBP11.95□□□□□ -0.5
SGCE-204ENST00000428696 QRFPP83859 136 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 PLA2G7Q13093 441 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 SCGB2A2Q13296 93 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 RUSC1-AS1Q66K80 236 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 SFXN4Q6P4A7 337 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 C6orf201Q7Z4U5 140 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 BCL6BQ8N143 479 aaPredicted RBP11.95□□□□□ -0.5
SGCE-204ENST00000428696 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 DYRK2Q92630 601 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 NAA50Q9GZZ1 169 aaKnown RBP11.95□□□□□ -0.5
SGCE-204ENST00000428696 OR6C3Q9NZP0 311 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 ZNF69Q9UC07 566 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 TRAPPC2LQ9UL33 140 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 SOX21Q9Y651 276 aaPredicted RBP11.95□□□□□ -0.5
SGCE-204ENST00000428696 LINC00312Q9Y6C7 94 aa11.95□□□□□ -0.5
SGCE-204ENST00000428696 A0A075B6Q4 140 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 CENPVL3A0A0U1RRI6 287 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 TMEM30CPA0ZSE6 113 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 IFNA2P01563 188 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 OMGP23515 440 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 RPS19P39019 145 aaKnown RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 ALDH3B2P48448 385 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 EFNB2P52799 333 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 DYNC1I2Q13409 638 aaKnown RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 CLVS1Q8IUQ0 354 aaPredicted RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 PNKDQ8N490 385 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 OR4K15Q8NH41 348 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 RFESDQ8TAC1 157 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 SETD6Q8TBK2 473 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 MRGPRDQ8TDS7 321 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 LPAR5Q9H1C0 372 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 GAL3ST2Q9H3Q3 398 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 HEXA-AS1Q9H8Q6 139 aa11.94□□□□□ -0.5
SGCE-204ENST00000428696 CHMP1AQ9HD42 196 aaPredicted RBP11.94□□□□□ -0.5
SGCE-204ENST00000428696 UBE2J1Q9Y385 318 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms