RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 PRSS22Q9GZN4 317 aa14.78□□□□□ -0.04
PSPC1-202ENST00000427943 ZNF581Q9P0T4 197 aa14.78□□□□□ -0.04
PSPC1-202ENST00000427943 DPM3Q9P2X0 92 aa14.78□□□□□ -0.04
PSPC1-202ENST00000427943 KIF25Q9UIL4 384 aa14.78□□□□□ -0.04
PSPC1-202ENST00000427943 EXOSC1Q9Y3B2 195 aaKnown RBP14.78□□□□□ -0.04
PSPC1-202ENST00000427943 TRAV24A0A0B4J272 114 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 CDRT1O95170 752 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 HTR3BO95264 441 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 IGLV1-47P01700 117 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 NFYBP25208 207 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 PPP3R1P63098 170 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 ADARB1P78563 741 aaKnown RBP14.77□□□□□ -0.05
PSPC1-202ENST00000427943 BDH1Q02338 343 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 RBM39Q14498 530 aaKnown RBP14.77□□□□□ -0.05
PSPC1-202ENST00000427943 IL13RA2Q14627 380 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 FBLN7Q53RD9 439 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 DHRSXQ8N5I4 330 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 DTX3Q8N9I9 347 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 OR51T1Q8NGJ9 327 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 OR13A1Q8NGR1 328 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 PLPPR1Q8TBJ4 325 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 BABAM2Q9NXR7 383 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 OR6C3Q9NZP0 311 aa14.77□□□□□ -0.05
PSPC1-202ENST00000427943 MEIKINA0A087WXM9 373 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 OGG1O15527 345 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 FBXO24O75426 580 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 CD34P28906 385 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 BLCAPP62952 87 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 HLA-DRB5Q30154 266 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 PACRGLQ8N7B6 248 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 TMEM80Q96HE8 168 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 KIRREL1Q96J84 757 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 TMEM138Q9NPI0 162 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 CALYQ9NYX4 217 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 ING4Q9UNL4 249 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 ZNF281Q9Y2X9 895 aa14.76□□□□□ -0.05
PSPC1-202ENST00000427943 PNMA8CA0A1B0GUJ8 204 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 FAM90A22PA8MWA6 464 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 TOR1AO14656 332 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 PEX14O75381 377 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 IGHV3-7P01780 117 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 ALDOBP05062 364 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 CD28P10747 220 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 BDKRB2P30411 391 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 ZNF93P35789 620 aaPredicted RBP14.75□□□□□ -0.05
PSPC1-202ENST00000427943 LTC4SQ16873 150 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 NSUN5P1Q3KNT7 163 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 RSBN1Q5VWQ0 802 aaPredicted RBP14.75□□□□□ -0.05
PSPC1-202ENST00000427943 OR52N1Q8NH53 320 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 GGHQ92820 318 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 GHSRQ92847 366 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 LEAP2Q969E1 77 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 C8orf4Q9NR00 106 aa14.75□□□□□ -0.05
PSPC1-202ENST00000427943 CHCHD3Q9NX63 227 aaKnown RBP14.75□□□□□ -0.05
PSPC1-202ENST00000427943 A0A087X0M5 115 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 TRAV39A0A0B4J263 110 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 TRBV5-5A0A0J9YX44 114 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 KBTBD11-OT1A0A1B0GTJ5 212 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 A0A1B0GX30 115 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 MAGEA13PA6NCF6 341 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 LEUTXA8MZ59 168 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 BUB1B-PAK6H3BSN5 160 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 GNAO1P09471 354 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 CGB3P0DN86 165 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 CGB7P0DN87 165 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 SERPINA2P20848 420 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 BRS3P32247 399 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 VDAC2P45880 294 aaPredicted RBP14.74□□□□□ -0.05
PSPC1-202ENST00000427943 RBM11P57052 281 aaKnown RBP14.74□□□□□ -0.05
PSPC1-202ENST00000427943 ST3GAL4Q11206 333 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 MED21Q13503 144 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 RIPK1Q13546 671 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 TPTE2P1Q5T6R2 138 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 DMKNQ6E0U4 476 aaPredicted RBP14.74□□□□□ -0.05
PSPC1-202ENST00000427943 ASCL4Q6XD76 172 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 OSR2Q8N2R0 312 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 Q8NFD4 153 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 MRGPRDQ8TDS7 321 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 ZNF184Q99676 751 aaPredicted RBP14.74□□□□□ -0.05
PSPC1-202ENST00000427943 METTL9Q9H1A3 318 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.74□□□□□ -0.05
PSPC1-202ENST00000427943 ST3GAL6Q9Y274 331 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 TGP01266 2768 aa14.74□□□□□ -0.05
PSPC1-202ENST00000427943 TRAV8-7A0A075B6U6 113 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 XPNPEP2O43895 674 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 CSTBP04080 98 aaKnown RBP14.73□□□□□ -0.05
PSPC1-202ENST00000427943 IGFBP3P17936 291 aaPredicted RBP14.73□□□□□ -0.05
PSPC1-202ENST00000427943 CEACAM3P40198 252 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 ARHGDIBP52566 201 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 PRRX1P54821 245 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 LAIR2Q6ISS4 152 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 C8orf59Q8N0T1 100 aaPredicted RBP14.73□□□□□ -0.05
PSPC1-202ENST00000427943 SUMF2Q8NBJ7 301 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 ZNF485Q8NCK3 441 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 OR9G1Q8NH87 305 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 PGLYRP3Q96LB9 341 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 S100A13Q99584 98 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 SLC25A33Q9BSK2 321 aa14.73□□□□□ -0.05
PSPC1-202ENST00000427943 DPCDQ9BVM2 203 aaPredicted RBP14.73□□□□□ -0.05
PSPC1-202ENST00000427943 BARHL1Q9BZE3 327 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms