RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 PLEKHF2Q9H8W4 249 aa6.51□□□□□ -1.37
LINC01108-201ENST00000427276 FGF21Q9NSA1 209 aa6.51□□□□□ -1.37
LINC01108-201ENST00000427276 KIAA1456Q9P272 454 aa6.51□□□□□ -1.37
LINC01108-201ENST00000427276 MUC22E2RYF6 1773 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 XKRY2A2RUG3 117 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF705FA8MVS1 300 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 PIAS2O75928 621 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 IGHV3-9P01782 118 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF705DP0CH99 300 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF705BP0CI00 300 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ECI1P42126 302 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 GLIPR1P48060 266 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 TAS2R60P59551 318 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 DLX2Q07687 328 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 C9orf135Q5VTT2 229 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 PLCXD3Q63HM9 321 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 SPSB3Q6PJ21 355 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 RHBDD1Q8TEB9 315 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 HIST1H2BLQ99880 126 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ULBP2Q9BZM5 246 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 SLC7A10Q9NS82 523 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 PLA2G3Q9NZ20 509 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 HS3ST3A1Q9Y663 406 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 CD55P08174 381 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 METTL15P1P0C7V9 234 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 MSR1P21757 451 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 PMS2P11Q13670 270 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 BEND4Q6ZU67 534 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 C1QL4Q86Z23 238 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 FAM89BQ8N5H3 189 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF837Q96EG3 531 aaPredicted RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 SGCZQ96LD1 299 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF385AQ96PM9 386 aaKnown RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 BCO1Q9HAY6 547 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 FBLN5Q9UBX5 448 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 CD207Q9UJ71 328 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 VPS13AQ96RL7 3174 aa6.5□□□□□ -1.37
LINC01108-201ENST00000427276 CHD3Q12873 2000 aaKnown RBP6.5□□□□□ -1.37
LINC01108-201ENST00000427276 ARGFXA6NJG6 315 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 IFNL4K9M1U5 179 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 MPPED1O15442 326 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 TRAF3IP2O43734 574 aaPredicted RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 PPYP01298 95 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 FGF7P21781 194 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ZP4Q12836 540 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 CST9LP1Q5W188 147 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 KIAA0895LQ68EN5 471 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SLC25A26Q70HW3 274 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 GAPTQ8N292 157 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SPTSSAQ969W0 71 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 MSI2Q96DH6 328 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OR5B12Q96R08 314 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SPIN2AQ99865 258 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SPIN2BQ9BPZ2 258 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SMIM7Q9BQ49 75 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 CALHM2Q9HA72 323 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 CBLN4Q9NTU7 201 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OR14J1Q9UGF5 321 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 TMED3Q9Y3Q3 217 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 MAP1BP46821 2468 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 PROB1E7EW31 1015 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SUCLG1P53597 346 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 RTP5Q14D33 572 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OR8G2PQ6IF36 304 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF774Q6NX45 483 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF705AQ6ZN79 300 aaPredicted RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 DBX2Q6ZNG2 339 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OSR2Q8N2R0 312 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 Q8NFD4 153 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OR1K1Q8NGR3 316 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SNIP1Q8TAD8 396 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 PP6455Q8WZ26 134 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 Q96M66 194 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 MRPL13Q9BYD1 178 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 VSIRQ9H7M9 311 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 C2orf16Q68DN1 1984 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ELOA3CA0A087WX78 387 aaPredicted RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 IGKV3D-11A0A0A0MRZ8 115 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 TRAV39A0A0B4J263 110 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 IGHV3-64DA0A0J9YX35 117 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 PPP5D1E7EU14 171 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 NRASP01111 189 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 HBE1P02100 147 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 TK1P04183 234 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 SERPINE2P07093 398 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 FOSL2P15408 326 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 RPL29P47914 159 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 PHYHD1Q5SRE7 291 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 C1orf185Q5T7R7 199 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 RTL6Q6ICC9 239 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 WDR73Q6P4I2 378 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 FAM185AQ8N0U4 392 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ZNF664Q8N3J9 261 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 RBMXL1Q96E39 390 aaKnown RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 GNPNAT1Q96EK6 184 aaPredicted RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OXGR1Q96P68 337 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 ALKBH3Q96Q83 286 aaPredicted RBP6.49□□□□□ -1.37
LINC01108-201ENST00000427276 HIST1H2AAQ96QV6 131 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 OR51B6Q9H340 312 aa6.49□□□□□ -1.37
LINC01108-201ENST00000427276 NCOR1P1Q9H4R4 102 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms