RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 VHLLQ6RSH7 139 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 ACP7Q6ZNF0 438 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 ZNF826PQ6ZT77 177 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 MOB1BQ7L9L4 216 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 FAM90A1Q86YD7 464 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 LILRB4Q8NHJ6 448 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 MRPL30Q8TCC3 161 aaKnown RBP12.18□□□□□ -0.46
CDK3-201ENST00000425876 ZFAND1Q8TCF1 268 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 RNASE6Q93091 150 aaKnown RBP12.18□□□□□ -0.46
CDK3-201ENST00000425876 MEGF10Q96KG7 1140 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 TMEM165Q9HC07 324 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 PIPOXQ9P0Z9 390 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 ZDHHC8Q9ULC8 765 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 MGAT4AQ9UM21 535 aa12.18□□□□□ -0.46
CDK3-201ENST00000425876 A0A0B4J2A0 478 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 TRDCB7Z8K6 153 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 HAND1O96004 215 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 CTSDP07339 412 aaPredicted RBP12.17□□□□□ -0.46
CDK3-201ENST00000425876 AKR1C4P17516 323 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 GLRA1P23415 457 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 CD34P28906 385 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 UCP3P55916 312 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 SMIM21Q3B7S5 101 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 ZBTB8BQ8NAP8 495 aaPredicted RBP12.17□□□□□ -0.46
CDK3-201ENST00000425876 TMEM230Q96A57 120 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 LRRC46Q96FV0 321 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 PHB2Q99623 299 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 UFSP2Q9NUQ7 469 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 C1orf123Q9NWV4 160 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 SHPKQ9UHJ6 478 aa12.17□□□□□ -0.46
CDK3-201ENST00000425876 C14orf166Q9Y224 244 aaKnown RBP12.17□□□□□ -0.46
CDK3-201ENST00000425876 IGHV3-64DA0A0J9YX35 117 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 VSTM5A8MXK1 200 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 SRRM5B3KS81 715 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 SMLR1H3BR10 107 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 HSPB6O14558 160 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 SLC22A5O76082 557 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 RGS11O94810 467 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 ADH4P08319 380 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 PGAM2P15259 253 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 KCNJ3P48549 501 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 ZNF81P51508 661 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 SEC61A1P61619 476 aaKnown RBP12.16□□□□□ -0.46
CDK3-201ENST00000425876 SORDQ00796 357 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 ZNF497Q6ZNH5 498 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 OR2T35Q8NGX2 323 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 MOB3AQ96BX8 217 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 OR2V2Q96R30 315 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 DIRC2Q96SL1 478 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 LIME1Q9H400 295 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
CDK3-201ENST00000425876 IL19Q9UHD0 177 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 BAHCC1Q9P281 2608 aa12.16□□□□□ -0.46
CDK3-201ENST00000425876 PLCE1Q9P212 2302 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 hCG_1807616A0A1W2PRN6 198 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 SIRPB1O00241 398 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 SFT2D2O95562 160 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 TNFSF4P23510 183 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 DNASE1P24855 282 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 FCGR2CP31995 323 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 ADORA2A-AS1P86434 159 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 SRSF4Q08170 494 aaKnown RBP12.15□□□□□ -0.46
CDK3-201ENST00000425876 C2orf68Q2NKX9 166 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 UXS1Q8NBZ7 420 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 OR4A4PQ8NGN8 299 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 LRRC29Q8WV35 223 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 ERGIC1Q969X5 290 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 CLEC4MQ9H2X3 399 aaPredicted RBP12.15□□□□□ -0.46
CDK3-201ENST00000425876 NDRG3Q9UGV2 375 aa12.15□□□□□ -0.46
CDK3-201ENST00000425876 FAM172BPA6NC97 362 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 C3orf80F5H4A9 247 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 G3V3Q6 166 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 GOSR2O14653 212 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 WNT9BO14905 357 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 SNAPC5O75971 98 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 TK1P04183 234 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 ZNF728P0DKX0 622 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 RPS2P15880 293 aaKnown RBP12.14□□□□□ -0.47
CDK3-201ENST00000425876 VAMP1P23763 118 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 H2BFSP57053 126 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 BAMBIQ13145 260 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 ADIPOQQ15848 244 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 LIN54Q6MZP7 749 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 C11orf88Q6PI97 169 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 OR5M8Q8NGP6 311 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 PIK3IP1Q96FE7 263 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 FXYD6Q9H0Q3 95 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 MBNL3Q9NUK0 354 aaKnown RBP12.14□□□□□ -0.47
CDK3-201ENST00000425876 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 OPN4Q9UHM6 478 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 PCDHB10Q9UN67 800 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 WIPI2Q9Y4P8 454 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 CFAP46Q8IYW2 2715 aa12.14□□□□□ -0.47
CDK3-201ENST00000425876 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 SPRY3O43610 288 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 DIRAS3O95661 229 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 LHBP01229 141 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 IGHV1-46P01743 117 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 SCTP09683 121 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms