RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 RFX3P48380 749 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 IDH2P48735 452 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CAV3P56539 151 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BDP58876 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BCP62807 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 DYNLL1P63167 89 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ARF5P84085 180 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 FABP5Q01469 135 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SLC25A11Q02978 314 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF616Q08AN1 781 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 PJVKQ0ZLH3 352 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ST3GAL4Q11206 333 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 IL24Q13007 206 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MLLT11Q13015 90 aaPredicted RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SCGB2A2Q13296 93 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 GPM6BQ13491 265 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MOBPQ13875 183 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 IL18Q14116 193 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 RCAN2Q14206 197 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST2H2BEQ16778 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 BEX5Q5H9J7 111 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 AKR1C8PQ5T2L2 129 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 C1orf194Q5T5A4 169 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 IDNKQ5T6J7 187 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HENMT1Q5T8I9 393 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST2H3PS2Q5TEC6 136 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 RTL6Q6ICC9 239 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR2A2Q6IF42 318 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SLC39A4Q6P5W5 647 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 DPY19L2P2Q6ZN68 376 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TMPPEQ6ZT21 453 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SSX7Q7RTT5 188 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 GOLGA7Q7Z5G4 137 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 PPP1R27Q86WC6 154 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 VRK2Q86Y07 508 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HDDC3Q8N4P3 179 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 KCNRGQ8N5I3 272 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 JAGN1Q8N5M9 183 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR5L2Q8NGL0 311 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR1L6Q8NGR2 347 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR10A6Q8NH74 314 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR56B4Q8NH76 319 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TERB2Q8NHR7 220 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CASTOR1Q8WTX7 329 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ORAOV1Q8WV07 137 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ARNTL2Q8WYA1 636 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BHQ93079 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ARL11Q969Q4 196 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CMBLQ96DG6 245 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SMIM12Q96EX1 92 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SMARCD1Q96GM5 515 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR8B4Q96RC9 309 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 STACQ99469 402 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 S100A13Q99584 98 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BNQ99877 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BMQ99879 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BLQ99880 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MRPL57Q9BQC6 102 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 FICDQ9BVA6 458 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CACNG6Q9BXT2 260 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ANGPTL4Q9BY76 406 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TBL1XR1Q9BZK7 514 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CHIAQ9BZP6 476 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR2J1Q9GZK6 312 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SLC25A31Q9H0C2 315 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 DHX35Q9H5Z1 703 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TPT1P8Q9HAU6 139 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM27Q9HBJ8 222 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 NOX3Q9HBY0 568 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CSNK1G1Q9HCP0 422 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 EXOSC4Q9NPD3 245 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MMP26Q9NRE1 261 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ASF1BQ9NVP2 202 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MS4A12Q9NXJ0 267 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CNOT2Q9NZN8 540 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 FLVCR2Q9UPI3 526 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SAMD4AQ9UPU9 718 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 FOXJ3Q9UPW0 622 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 PIN4Q9Y237 131 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 KCNK6Q9Y257 313 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 COQ4Q9Y3A0 265 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HDGFL3Q9Y3E1 203 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 OR10H1Q9Y4A9 318 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 UBIAD1Q9Y5Z9 338 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 V9GYS6 101 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 NCKAP5O14513 1909 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 UBR3Q6ZT12 1888 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 UNC79Q9P2D8 2635 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 GREB1Q4ZG55 1949 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF236Q9UL36 1845 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 TRAV39A0A0B4J263 110 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 IGHV2-70DA0A0C4DH43 119 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 A0A0D9SG52 128 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 KIR2DS1A0A191URI9 304 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ANKRD20A5PA0PJZ0 165 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 C20orf202A1L168 122 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 SMCO3A2RU48 225 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 OR52A4PA6NMU1 304 aa2.27□□□□□ -2.05
LINC01040-201ENST00000425048 ZNF716A6NP11 495 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms