RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 ZNF665Q9H7R5 613 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 IGHV3-7P01780 117 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 OMGP23515 440 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 GNG2P59768 71 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 IL13RA1P78552 427 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 GSX2Q9BZM3 304 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 SONP18583 2426 aaKnown RBP11.16□□□□□ -0.62
PRPF39-202ENST00000424478 CSN2P05814 226 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 PDLIM4P50479 330 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 TMEM33P57088 247 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 DYNC1I2Q13409 638 aaKnown RBP11.16□□□□□ -0.62
PRPF39-202ENST00000424478 UTF1Q5T230 341 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 HACD4Q5VWC8 232 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 WFDC11Q8NEX6 87 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 C10orf105Q8TEF2 133 aa11.16□□□□□ -0.62
PRPF39-202ENST00000424478 SLC25A10Q9UBX3 287 aaPredicted RBP11.16□□□□□ -0.62
PRPF39-202ENST00000424478 MEIKINA0A087WXM9 373 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 CYSRT1A8MQ03 144 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 TNFRSF13BO14836 293 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-202ENST00000424478 HLA-DMAP28067 261 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 PRSS3P35030 304 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 ETV6P41212 452 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 KRBOX4Q5JUW0 171 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 CLDND2Q8NHS1 167 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 RFESDQ8TAC1 157 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 MRGPRDQ8TDS7 321 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 C19orf12Q9NSK7 152 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 GLS2Q9UI32 602 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 ABCA1O95477 2261 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 K7N7A8 449 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 SIGLEC5O15389 551 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 CSF3P09919 207 aa11.15□□□□□ -0.62
PRPF39-202ENST00000424478 FBXO9Q9UK97 447 aaPredicted RBP11.15□□□□□ -0.62
PRPF39-202ENST00000424478 LCN2P80188 198 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 PYHIN1Q6K0P9 492 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 BAIAP2L2Q6UXY1 529 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 KRTAP1-3Q8IUG1 177 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 OR4D10Q8NGI6 311 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 OR13A1Q8NGR1 328 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 SDSLQ96GA7 329 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 MYOZ1Q9NP98 299 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 NKX6-3A6NJ46 265 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 ZFP36P26651 326 aaKnown RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 SSTR5P35346 364 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 MRPS11P82912 194 aaKnown RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 GDPD3Q7L5L3 318 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 MRPL30Q8TCC3 161 aaKnown RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 Q96MF0 132 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 THAP7Q9BT49 309 aaPredicted RBP11.14□□□□□ -0.63
PRPF39-202ENST00000424478 ORC5O43913 435 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 TMEM127O75204 238 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 CCL3L1P16619 93 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 LMO1P25800 156 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 CD40LGP29965 261 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 GLP1RP43220 463 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF841Q6ZN19 808 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 PIMREGQ9BSJ6 248 aa11.14□□□□□ -0.63
PRPF39-202ENST00000424478 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 M0QYG6 137 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 NR4A2P43354 598 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 SLC36A1Q7Z2H8 476 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF561Q8N587 486 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 SNAPC3Q92966 411 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 FAM157AC9JC47 383 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 SDCBPO00560 298 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-202ENST00000424478 NDUFB3O43676 98 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 FCGR3AP08637 254 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 WNT2P09544 360 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 GDNFP39905 211 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 RFX2P48378 723 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF273Q14593 569 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF846Q147U1 533 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 TCF23Q7RTU1 214 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 CIARTQ8N365 385 aaPredicted RBP11.13□□□□□ -0.63
PRPF39-202ENST00000424478 FCAMRQ8WWV6 532 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 IL1F10Q8WWZ1 152 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 SNX22Q96L94 193 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 RHOFQ9HBH0 211 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 HSF4Q9ULV5 492 aa11.13□□□□□ -0.63
PRPF39-202ENST00000424478 IGHV3-43A0A0B4J1X8 118 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IFNL4K9M1U5 179 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 MT-ND4P03905 459 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 SCTP09683 121 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IGHV3-43DP0DP04 118 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 IL7P13232 177 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 MRPS15P82914 257 aaKnown RBP11.12□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF45Q02386 682 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 ZNF497Q6ZNH5 498 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 BTN2A1Q7KYR7 527 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 FAM185AQ8N0U4 392 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 GPX8Q8TED1 209 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 TMPRSS13Q9BYE2 586 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 C12orf4Q9NQ89 552 aa11.12□□□□□ -0.63
PRPF39-202ENST00000424478 CLN8Q9UBY8 286 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms