RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 RPL12P30050 165 aaKnown RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 TAS2R31P59538 309 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF616Q08AN1 781 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 PAN3Q58A45 887 aaKnown RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 RIPPLY2Q5TAB7 128 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 BAP18Q8IXM2 172 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 ZFP62Q8NB50 900 aaPredicted RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 POC1AQ8NBT0 407 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OR1J1Q8NGS3 322 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 C20orf24Q9BUV8 137 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OBP2BQ9NPH6 170 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 KIF25Q9UIL4 384 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 K7EPK0 472 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ABCD4O14678 606 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 TPPPO94811 219 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 TNFSF10P50591 281 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 WDR86Q86TI4 376 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 MKXQ8IYA7 352 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 FAM71E2Q8N5Q1 922 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 SUMF2Q8NBJ7 301 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 SLC25A40Q8TBP6 338 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 DCTN5Q9BTE1 182 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ERRFI1Q9UJM3 462 aaPredicted RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 CHD3Q12873 2000 aaKnown RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ANKRD30BLA7E2S9 258 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 UBE2NP61088 152 aaKnown RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 UBA52P62987 128 aaKnown RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF169Q14929 603 aaPredicted RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 TBC1D26Q86UD7 250 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 CBLN2Q8IUK8 224 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ABHD14AQ9BUJ0 271 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 SLC5A7Q9GZV3 580 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 C1orf123Q9NWV4 160 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 KCNS2Q9ULS6 477 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 SSSCA1O60232 199 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 WDR1O75083 606 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 HKR1P10072 659 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 NFYBP25208 207 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 SPINK9Q5DT21 86 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 FAM201AQ5SY85 155 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 FBXW9Q5XUX1 488 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 TMEM42Q69YG0 159 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF808Q8N4W9 903 aaPredicted RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 C9orf106Q8NAJ2 232 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 APOBEC3DQ96AK3 386 aaPredicted RBP10.18□□□□□ -0.78
PTPRN-204ENST00000423636 TAF9BQ9HBM6 251 aa10.18□□□□□ -0.78
PTPRN-204ENST00000423636 YLPM1P49750 1951 aaKnown RBP10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CRYM-AS1A6NIL9 109 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 IFNA21P01568 189 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 HOXD4P09016 255 aaPredicted RBP10.17□□□□□ -0.78
PTPRN-204ENST00000423636 GLP1RP43220 463 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 LPAR6P43657 344 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CBX5P45973 191 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 FAM234AQ9H0X4 552 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 GHRLQ9UBU3 117 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 KCNIP3Q9Y2W7 256 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CYC1P08574 325 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF883P0CG24 379 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 PPA1Q15181 289 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CLPPQ16740 277 aaPredicted RBP10.17□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF565Q8N9K5 539 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 OR1K1Q8NGR3 316 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 WFDC1Q9HC57 220 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 RAB18Q9NP72 206 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CELSR1Q9NYQ6 3014 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 PQLC2LA1A4F0 135 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 TM4SF5O14894 197 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 DNPH1O43598 174 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 OR8U9P0C7N5 309 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 SLC25A4P12235 298 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 TBPP20226 339 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 CEACAM21Q3KPI0 293 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 ACTBL2Q562R1 376 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 PRSS54Q6PEW0 395 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 OR8U1Q8NH10 309 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 RNASE11Q8TAA1 199 aaKnown RBP10.17□□□□□ -0.78
PTPRN-204ENST00000423636 TAAR6Q96RI8 345 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 SUCNR1Q9BXA5 334 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 NAA60Q9H7X0 242 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 BARX1Q9HBU1 254 aaPredicted RBP10.17□□□□□ -0.78
PTPRN-204ENST00000423636 AUP1Q9Y679 476 aa10.17□□□□□ -0.78
PTPRN-204ENST00000423636 TRAV24A0A0B4J272 114 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 C9JQL5 133 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 TOR1AO14656 332 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 ADAM20O43506 726 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 TPT1P13693 172 aaKnown RBP10.16□□□□□ -0.78
PTPRN-204ENST00000423636 ALDH3B1P43353 468 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 LPCAT3Q6P1A2 487 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 CNTNAP3BQ96NU0 1288 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 CNTNAP3Q9BZ76 1288 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 NMES1Q9C002 83 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 METRNQ9UJH8 293 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 AMDHD2Q9Y303 409 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 CACNA1BQ00975 2339 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 F8W036 122 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 SHOXO15266 292 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 TUSC2O75896 110 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 NXPH2O95156 264 aa10.16□□□□□ -0.78
PTPRN-204ENST00000423636 FGF2P09038 288 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms