RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FDX2Q6P4F2 183 aa12.87□□□□□ -0.35
COL18A1-205ENST00000423214 APH1BQ8WW43 257 aa12.87□□□□□ -0.35
COL18A1-205ENST00000423214 RPEQ96AT9 228 aa12.87□□□□□ -0.35
COL18A1-205ENST00000423214 COQ2Q96H96 371 aa12.87□□□□□ -0.35
COL18A1-205ENST00000423214 PCDHB16Q9NRJ7 776 aa12.87□□□□□ -0.35
COL18A1-205ENST00000423214 PSMB11A5LHX3 300 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 DEGS1O15121 323 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 TMEM225BP0DP42 221 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 ALKBH1Q13686 389 aaKnown RBP12.86□□□□□ -0.35
COL18A1-205ENST00000423214 GALEQ14376 348 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 SMN1Q16637 294 aaKnown RBP12.86□□□□□ -0.35
COL18A1-205ENST00000423214 LPCAT4Q643R3 524 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 C10orf99Q6UWK7 81 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 OSR2Q8N2R0 312 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 ZNF555Q8NEP9 628 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 OR51D1Q8NGF3 324 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 OR52I1Q8NGK6 324 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 OR9G1Q8NH87 305 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 MYCBPQ99417 103 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-205ENST00000423214 ZNF649Q9BS31 505 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 GPR61Q9BZJ8 451 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 PPIL3Q9H2H8 161 aaKnown RBP12.86□□□□□ -0.35
COL18A1-205ENST00000423214 ZCCHC4Q9H5U6 513 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 ERVK13-1Q9NX77 482 aa12.86□□□□□ -0.35
COL18A1-205ENST00000423214 SMPD3Q9NY59 655 aaPredicted RBP12.86□□□□□ -0.35
COL18A1-205ENST00000423214 A0A087X0M5 115 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 A0A1B0GX30 115 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 OR4C45A6NMZ5 311 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 ANKRD65E5RJM6 399 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 E9PI62 339 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 H0YJX3 145 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 K7EIL1 84 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 SULT1B1O43704 296 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 FADS2O95864 444 aaKnown RBP12.85□□□□□ -0.35
COL18A1-205ENST00000423214 FAM106CPP0CH98 169 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 ZSCAN26Q16670 478 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 Q6P435 159 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 TSEN15Q8WW01 171 aaKnown RBP12.85□□□□□ -0.35
COL18A1-205ENST00000423214 CPNE2Q96FN4 548 aaPredicted RBP12.85□□□□□ -0.35
COL18A1-205ENST00000423214 KIRREL1Q96J84 757 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 RPL36Q9Y3U8 105 aaKnown RBP12.85□□□□□ -0.35
COL18A1-205ENST00000423214 COL7A1Q02388 2944 aa12.85□□□□□ -0.35
COL18A1-205ENST00000423214 KBTBD11-OT1A0A1B0GTJ5 212 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 WBP4O75554 376 aaKnown RBP12.84□□□□□ -0.35
COL18A1-205ENST00000423214 AMY1AP04745 511 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 AMY2AP04746 511 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 SNRNP70P08621 437 aaKnown RBP12.84□□□□□ -0.35
COL18A1-205ENST00000423214 MTNR1BP49286 362 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 RAB40BQ12829 278 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 HES1Q14469 280 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 KISS1Q15726 138 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 C17orf58Q2M2W7 97 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 PAN3Q58A45 887 aaKnown RBP12.84□□□□□ -0.35
COL18A1-205ENST00000423214 DEFB121Q5J5C9 76 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 VAX1Q5SQQ9 334 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 RNF144BQ7Z419 303 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 OR5D14Q8NGL3 314 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 OR56B4Q8NH76 319 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 NR1H4Q96RI1 486 aaPredicted RBP12.84□□□□□ -0.35
COL18A1-205ENST00000423214 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL18A1-205ENST00000423214 INPP5EQ9NRR6 644 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 CALYQ9NYX4 217 aa12.84□□□□□ -0.35
COL18A1-205ENST00000423214 MEIKINA0A087WXM9 373 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 LY6LH3BQJ8 138 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 RPSAP08865 295 aaKnown RBP12.83□□□□□ -0.36
COL18A1-205ENST00000423214 TMEM11P17152 192 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 CDK5R1Q15078 307 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 RCN1Q15293 331 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 LTC4SQ16873 150 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 ZNF691Q5VV52 312 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 SERPINA12Q8IW75 414 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 SYS1Q8N2H4 156 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 LINC00482Q8N8I6 264 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 ZNF565Q8N9K5 539 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 OR51T1Q8NGJ9 327 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 CNIH3Q8TBE1 160 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 CHPT1Q8WUD6 406 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 CYGBQ8WWM9 190 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 GPER1Q99527 375 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 PDCD1LG2Q9BQ51 273 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 FAM192AQ9GZU8 254 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 MRPS18AQ9NVS2 196 aaKnown RBP12.83□□□□□ -0.36
COL18A1-205ENST00000423214 KIF25Q9UIL4 384 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 DHDHQ9UQ10 334 aa12.83□□□□□ -0.36
COL18A1-205ENST00000423214 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 NUDT19A8MXV4 375 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 J3QR06 171 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 MAGEB3O15480 346 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 ZFPL1O95159 310 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 IL1AP01583 271 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 IGHV3-7P01780 117 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 CCDC159P0C7I6 412 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 LIMS3P0CW19 117 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 LIMS4P0CW20 117 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 C21orf33P30042 268 aaPredicted RBP12.82□□□□□ -0.36
COL18A1-205ENST00000423214 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
COL18A1-205ENST00000423214 GNG10P50151 68 aa12.82□□□□□ -0.36
COL18A1-205ENST00000423214 GTF2A1P52655 376 aaPredicted RBP12.82□□□□□ -0.36
COL18A1-205ENST00000423214 ZP1P60852 638 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms