RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KCNJ3P48549 501 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 CLDN12P56749 244 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 OR10A3P58181 314 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 BPIFB3P59826 476 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 ERVFRD-1P60508 538 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 KCNG3Q8TAE7 436 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 C1orf147Q96MC9 270 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-202ENST00000421712 TMEM59Q9BXS4 323 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 KCNK15Q9H427 330 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 HEXA-AS1Q9H8Q6 139 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 SPACA1Q9HBV2 294 aa12.92□□□□□ -0.34
BRAT1-202ENST00000421712 UBE2J1Q9Y385 318 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-202ENST00000421712 SOX21Q9Y651 276 aaPredicted RBP12.92□□□□□ -0.34
BRAT1-202ENST00000421712 ODAMA1E959 279 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 SMIM30A4D0T7 59 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 H3BUI4 141 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 VSIG8P0DPA2 414 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 SRSF2Q01130 221 aaKnown RBP12.91□□□□□ -0.34
BRAT1-202ENST00000421712 RAB12Q6IQ22 244 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF782Q6ZMW2 699 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-202ENST00000421712 SIGLECL1Q8N7X8 197 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 ZNF565Q8N9K5 539 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 COQ2Q96H96 371 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 Q96M66 194 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 KCTD7Q96MP8 289 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 GAL3ST2Q9H3Q3 398 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 IFT22Q9H7X7 185 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 OR6C3Q9NZP0 311 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 STEAP1Q9UHE8 339 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 KIF25Q9UIL4 384 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 PEX16Q9Y5Y5 336 aa12.91□□□□□ -0.34
BRAT1-202ENST00000421712 SHISA3A0PJX4 238 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 C17orf98A8MV24 154 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 CD37P11049 281 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 FUT3P21217 361 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 COX7A1P24310 79 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 GLP1RP43220 463 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 RBM39Q14498 530 aaKnown RBP12.9□□□□□ -0.34
BRAT1-202ENST00000421712 C2orf76Q3KRA6 126 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 TIMM50Q3ZCQ8 353 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 NKAPLQ5M9Q1 402 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 OR51D1Q8NGF3 324 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 SLC25A28Q96A46 364 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 FAM3DQ96BQ1 224 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 NEDD4LQ96PU5 975 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 JMJD8Q96S16 334 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 URM1Q9BTM9 101 aaKnown RBP12.9□□□□□ -0.34
BRAT1-202ENST00000421712 FAM96BQ9Y3D0 163 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 DSCAML1Q8TD84 2053 aa12.9□□□□□ -0.34
BRAT1-202ENST00000421712 NF1P21359 2839 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A10PA6NDY2 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A18PA6NE21 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A16PA6NEW6 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A20PA6NIJ5 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A8PA6NJQ4 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A7PA6NKC0 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A22PA8MWA6 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 TMEM14DPA8MWL7 114 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A12PA8MX19 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A5PA8MXJ8 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A23PA8MXZ1 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 NPFFO15130 113 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A15PP0C7V4 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A13PP0C7W8 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A14PP0C7W9 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 FAM90A24PP0C7X0 464 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 IGHV1-8P0DP01 117 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 JUNBP17275 347 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-202ENST00000421712 UBE2E1P51965 193 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 DLX6P56179 175 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 RPS27AP62979 156 aaKnown RBP12.89□□□□□ -0.35
BRAT1-202ENST00000421712 MXD1Q05195 221 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 DEFB112Q30KQ8 113 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 TCF23Q7RTU1 214 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 OR2W3Q7Z3T1 314 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 TPRA1Q86W33 373 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 PNKDQ8N490 385 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 C11orf42Q8N5U0 333 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 OR13D1Q8NGV5 346 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 PLPPR1Q8TBJ4 325 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 CCDC107Q8WV48 283 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 CORO2AQ92828 525 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 TNFRSF14Q92956 283 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 RNF167Q9H6Y7 350 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 UNKLQ9H9P5 680 aaKnown RBP12.89□□□□□ -0.35
BRAT1-202ENST00000421712 ETAA1Q9NY74 926 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 TAS2R3Q9NYW6 316 aa12.89□□□□□ -0.35
BRAT1-202ENST00000421712 A0A0A6YYJ9 748 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 TRAV39A0A0B4J263 110 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 MDFIC2A0A1B0GVS7 189 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 TMEM30CPA0ZSE6 113 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 UBE2QL1A1L167 161 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 MEIOCA2RUB1 952 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 IFITM5A6NNB3 132 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 AIREO43918 545 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 PDCD6O75340 191 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 RBP4P02753 201 aa12.88□□□□□ -0.35
BRAT1-202ENST00000421712 SDC2P34741 201 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms