RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 OR4E1P0C645 316 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 AESQ08117 197 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 ACSF3Q4G176 576 aaPredicted RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 DBX2Q6ZNG2 339 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 COMMD7Q86VX2 200 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RAB18Q9NP72 206 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 C19orf12Q9NSK7 152 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 E9PLN8 166 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 CTAG2O75638 210 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 HMGN3Q15651 99 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 SUN5Q8TC36 379 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 FLYWCH2Q96CP2 140 aaKnown RBP9.35□□□□□ -0.91
PTCH1-206ENST00000421141 VKORC1Q9BQB6 163 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 PECRQ9BY49 303 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 IGHV1-69-2A0A0G2JMI3 117 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 IL5P05113 134 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 SLC35D1Q9NTN3 355 aa9.35□□□□□ -0.91
PTCH1-206ENST00000421141 RFPL3SP0C7P2 107 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SMIM17P0DL12 118 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 MMP16P51512 607 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ZNF561Q8N587 486 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 WDR31Q8NA23 367 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 DYNC2LI1Q8TCX1 351 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ATP6V1G2-DDX39BF2Z307 99 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 MS4A18H0YCH9 400 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SLC25A6P12236 298 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 HOXD11P31277 338 aaPredicted RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 PAFAH1B2P68402 229 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 MS4A18Q3C1V0 323 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 OR4C16Q8NGL9 310 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SFT2D1Q8WV19 159 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SMIM4Q8WVI0 70 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 RSRP1Q9BUV0 290 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 RPS10P5Q9NQ39 176 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 PLEKHB1Q9UF11 243 aaPredicted RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 LOC105371242A0A075B767 164 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 VDAC1P21796 283 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 DCTDP32321 178 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 NSUN5P2Q63ZY6 315 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 LFNGQ8NES3 379 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 KCNK17Q96T54 332 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 STARD10Q9Y365 291 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 USF3Q68DE3 2245 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 NKX2-5P52952 324 aaPredicted RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 NAAAQ02083 359 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SLC16A12Q6ZSM3 486 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 CDH26Q8IXH8 852 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ZDHHC22Q8N966 263 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 HSD17B11Q8NBQ5 300 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ALPK3Q96L96 1907 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 CHD3Q12873 2000 aaKnown RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ABCA1O95477 2261 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 RAB29O14966 203 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 GUCA2AQ02747 115 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 TIGITQ495A1 244 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SLC25A47Q6Q0C1 308 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 KLF14Q8TD94 323 aaPredicted RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 ITLN1Q8WWA0 313 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 HSD17B10Q99714 261 aaKnown RBP9.34□□□□□ -0.91
PTCH1-206ENST00000421141 LINC00470Q9BZP3 86 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 SMCO4Q9NRQ5 59 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 PMELP40967 661 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 DCAF12L2Q5VW00 463 aa9.34□□□□□ -0.91
PTCH1-206ENST00000421141 IGKV3D-11A0A0A0MRZ8 115 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 NPIPB13A6NJU9 1138 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 HSBP1L1C9JCN9 74 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 NPIPB4C9JG80 1138 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 IGHMP01871 453 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 PSMB6P28072 239 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 GLRXP35754 106 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 ASAH1Q13510 395 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 BTF3L4Q96K17 158 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 AKIRIN1Q9H9L7 192 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-206ENST00000421141 PLEKHA2Q9HB19 425 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 GPR179Q6PRD1 2367 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 TRAF3IP2O43734 574 aaPredicted RBP9.33□□□□□ -0.92
PTCH1-206ENST00000421141 COX5BP10606 129 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 COX5AP20674 150 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 UBE2MP61081 183 aaKnown RBP9.33□□□□□ -0.92
PTCH1-206ENST00000421141 DHRS9Q9BPW9 319 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 LOC102723996A0A087X1L8 192 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 CCSO14618 274 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 NUPL2O15504 423 aaKnown RBP9.33□□□□□ -0.92
PTCH1-206ENST00000421141 SSTR2P30874 369 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 LPAR6P43657 344 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF485Q8NCK3 441 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 NIPSNAP3BQ9BS92 247 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 KLK11Q9UBX7 282 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 LIMS3P0CW19 117 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 LIMS4P0CW20 117 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 MGAT2Q10469 447 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 KCNMB1Q16558 191 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 PIGYQ3MUY2 71 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 TMEM45BQ96B21 275 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 HARBI1Q96MB7 349 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 CCL13Q99616 98 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 TMEM208Q9BTX3 173 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 PRDM14Q9GZV8 571 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms