RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 H0YHG0 523 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 TSPAN9O75954 239 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 PAHP00439 452 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 CD37P11049 281 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 JUNBP17275 347 aaPredicted RBP16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 SRSF4Q08170 494 aaKnown RBP16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 RSU1Q15404 277 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 LRRC75BQ2VPJ9 315 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 KRBOX4Q5JUW0 171 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 FAM27D1Q5T7N8 215 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 PRAMEF5Q5TYX0 476 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 CCBE1Q6UXH8 406 aaPredicted RBP16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 HEPN1Q6WQI6 88 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 CDH26Q8IXH8 852 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 OSR2Q8N2R0 312 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 OR4D6Q8NGJ1 314 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 OR4P4Q8NGL7 312 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 MYDGFQ969H8 173 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 LINC00574Q9H8X3 128 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 ST3GAL6Q9Y274 331 aa16.66■□□□□ 0.26
PKNOX1-202ENST00000418336 PKD1L1Q8TDX9 2849 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 A0A087X0M5 115 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 A0A1B0GX30 115 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 CLPSL1A2RUU4 121 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 HSPB6O14558 160 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 GEMIN2O14893 280 aaKnown RBP16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 CHST1O43916 411 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 HTR3BO95264 441 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 ARG1P05089 322 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 CD34P28906 385 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 PROK1P58294 105 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 OLFML2AQ68BL7 652 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 SHISA2Q6UWI4 295 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 LRRTM1Q86UE6 522 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 OR13A1Q8NGR1 328 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 OR4F5Q8NH21 305 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 ING4Q9UNL4 249 aa16.65■□□□□ 0.26
PKNOX1-202ENST00000418336 TRGV10A0A0A0MS01 117 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 IGLV1-47P01700 117 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 MAS1P04201 325 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 CDK2P24941 298 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 SUMF2Q8NBJ7 301 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 MUL1Q969V5 352 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 MALSU1Q96EH3 234 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 BEX1Q9HBH7 125 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 SCN3BQ9NY72 215 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 RCC2Q9P258 522 aaKnown RBP16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 KIF25Q9UIL4 384 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 TPRKBQ9Y3C4 175 aa16.64■□□□□ 0.25
PKNOX1-202ENST00000418336 A0A1B0GUS0 222 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 CRYBA1P05813 215 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 SERPINA2P20848 420 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 GPR50Q13585 617 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 TPBGQ13641 420 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 ACSM3Q53FZ2 586 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 PAN3Q58A45 887 aaKnown RBP16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 TMEM91Q6ZNR0 172 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 CITED1Q99966 193 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 DPCDQ9BVM2 203 aaPredicted RBP16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 CLEC7AQ9BXN2 247 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 GAL3ST2Q9H3Q3 398 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 ZNF286AQ9HBT8 521 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 CKLFQ9UBR5 152 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 MGAM2Q2M2H8 2515 aa16.63■□□□□ 0.25
PKNOX1-202ENST00000418336 KBTBD11-OT1A0A1B0GTJ5 212 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 FUOMA2VDF0 154 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 ZNF729A6NN14 1252 aaPredicted RBP16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 NPIPB11E5RHQ5 1161 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 LY6LH3BQJ8 138 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 HSPA13P48723 471 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 RAB13P51153 203 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 DYNLT3P51808 116 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 LY6EQ16553 131 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 FBLN7Q53RD9 439 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 MINOS1Q5TGZ0 78 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 GLIPR1L1Q6UWM5 242 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 PRSS48Q7RTY5 328 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 TRAPPC6BQ86SZ2 158 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 LINC00596Q86U02 117 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 MS4A15Q8N5U1 240 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 TMEM104Q8NE00 496 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 KIRREL1Q96J84 757 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 GFI1Q99684 422 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 VCX3BQ9H321 246 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 ISYNA1Q9NPH2 558 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 ING3Q9NXR8 418 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 MRPS28Q9Y2Q9 187 aaKnown RBP16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 MINOS1-NBL1R4GNA1 71 aa16.62■□□□□ 0.25
PKNOX1-202ENST00000418336 A6NDX4 124 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 RGS10O43665 173 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 ZNF780AO75290 641 aaPredicted RBP16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 UCHL1P09936 223 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 MAP2K4P45985 399 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 LGALS4P56470 323 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 MED22Q15528 200 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 SSX2Q16385 188 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 MPV17LQ2QL34 196 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 SLC22A6Q4U2R8 563 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 PRR31Q5SQ13 230 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 SIGIRRQ6IA17 410 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms