RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 AHCTF1Q8WYP5 2266 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 TGIF1Q15583 401 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 MARVELD1Q9BSK0 173 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 CTDSP1Q9GZU7 261 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 RNF122Q9H9V4 155 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 MSL2Q9HCI7 577 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 INSIG2Q9Y5U4 225 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 SMIM17P0DL12 118 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 S100A4P26447 101 aaKnown RBP15.1■□□□□ 0.01
PHRF1-202ENST00000413872 IL24Q13007 206 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 CLEC2AQ6UVW9 174 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 PRNDQ9UKY0 176 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 ALX3O95076 343 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 PPYP01298 95 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 PGA4P0DJD7 388 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 FAM209AQ5JX71 171 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 GVQW1Q8N7I0 195 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 RELL2Q8NC24 303 aaPredicted RBP15.1■□□□□ 0.01
PHRF1-202ENST00000413872 GPA33Q99795 319 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 SFXN3Q9BWM7 321 aa15.1■□□□□ 0.01
PHRF1-202ENST00000413872 BATFQ16520 125 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 TBC1D26Q86UD7 250 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 OR5C1Q8NGR4 320 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 WDR61Q9GZS3 305 aaKnown RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 WIPI2Q9Y4P8 454 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 TPRP12270 2363 aaKnown RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 MEX3AA1L020 520 aaKnown RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 CBR1P16152 277 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 HLXQ14774 488 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 SLC25A47Q6Q0C1 308 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 GPR137Q96N19 417 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 OPN3Q9H1Y3 402 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 TTRP02766 147 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 RAB32Q13637 225 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 KIAA0141Q14154 515 aaPredicted RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 CEACAM21Q3KPI0 293 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 TEX30Q5JUR7 227 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 OR2W1Q9Y3N9 320 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 VSIG8P0DPA2 414 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 RPS4Y1P22090 263 aaKnown RBP15.09■□□□□ 0.01
PHRF1-202ENST00000413872 NDUFA6P56556 154 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 ST3GAL2Q16842 350 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 ADAM5Q6NVV9 412 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 KCNK17Q96T54 332 aa15.09■□□□□ 0.01
PHRF1-202ENST00000413872 MPC2O95563 127 aa15.08■□□□□ 0.01
PHRF1-202ENST00000413872 ASCL1P50553 236 aa15.08■□□□□ 0.01
PHRF1-202ENST00000413872 FHL5Q5TD97 284 aa15.08■□□□□ 0.01
PHRF1-202ENST00000413872 FSTP19883 344 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 KLRB1Q12918 225 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 FNDC7Q5VTL7 733 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 SHISA5Q8N114 240 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 MARS2Q96GW9 593 aaKnown RBP15.08■□□□□ 0
PHRF1-202ENST00000413872 CABLES2Q9BTV7 478 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 SH2D2AQ9NP31 389 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 SLC25A10Q9UBX3 287 aaPredicted RBP15.08■□□□□ 0
PHRF1-202ENST00000413872 IL17BQ9UHF5 180 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 LIPGQ9Y5X9 500 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 OR5H1A6NKK0 313 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 MGST3O14880 152 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 COX5BP10606 129 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 NQO2P16083 231 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 HOXA6P31267 233 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 SSTP61278 116 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 DUSP18Q8NEJ0 188 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 ZNF596Q8TC21 504 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 FLYWCH2Q96CP2 140 aaKnown RBP15.08■□□□□ 0
PHRF1-202ENST00000413872 V9GYS6 101 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 SYNGR2O43760 224 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 INHBBP09529 407 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 ERVFRD-1P60508 538 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 RPL31P62899 125 aaKnown RBP15.08■□□□□ 0
PHRF1-202ENST00000413872 FAM3AP98173 230 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 CEBPEQ15744 281 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 GP6Q9HCN6 339 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 FOXD3Q9UJU5 478 aaPredicted RBP15.08■□□□□ 0
PHRF1-202ENST00000413872 ZDHHC8Q9ULC8 765 aa15.08■□□□□ 0
PHRF1-202ENST00000413872 DSPPQ9NZW4 1301 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 CDK2AP1O14519 115 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 ADAM10O14672 748 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 ROM1Q03395 351 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 FUT5Q11128 374 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 PPP1R32Q7Z5V6 425 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 ADAT3Q96EY9 351 aaPredicted RBP15.07■□□□□ 0
PHRF1-202ENST00000413872 ST6GALNAC2Q9UJ37 374 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 SERTM2A0A1B0GWG4 89 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 NDUFA2O43678 99 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 UQCC3Q6UW78 93 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 DHRS9Q9BPW9 319 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 ARID1AO14497 2285 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 DNAJC13O75165 2243 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 TRAV8-7A0A075B6U6 113 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 PRF1P14222 555 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 CPN1P15169 458 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 PRDX2P32119 198 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 RBM11P57052 281 aaKnown RBP15.07■□□□□ 0
PHRF1-202ENST00000413872 PRR27Q6MZM9 219 aa15.07■□□□□ 0
PHRF1-202ENST00000413872 BRCA1P38398 1863 aaKnown RBP15.07■□□□□ 0
PHRF1-202ENST00000413872 SPNP16150 400 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 OR5M8Q8NGP6 311 aa15.06■□□□□ 0
PHRF1-202ENST00000413872 OR1K1Q8NGR3 316 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms