RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 IRF3Q14653 427 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 SLC22A6Q4U2R8 563 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 PLA1AQ53H76 456 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 OLFML2AQ68BL7 652 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 DHRS7BQ6IAN0 325 aaPredicted RBP12□□□□□ -0.49
LIMS4-201ENST00000413601 Q6ZSV7 163 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 JAGN1Q8N5M9 183 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 MUL1Q969V5 352 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 CLEC7AQ9BXN2 247 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 GAL3ST2Q9H3Q3 398 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 DUSP21Q9H596 190 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 TAS2R3Q9NYW6 316 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 TBL2Q9Y4P3 447 aaKnown RBP12□□□□□ -0.49
LIMS4-201ENST00000413601 ANK2Q01484 3957 aa12□□□□□ -0.49
LIMS4-201ENST00000413601 FBN3Q75N90 2809 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 CLPSL1A2RUU4 121 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 FAM172BPA6NC97 362 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 GEMIN2O14893 280 aaKnown RBP11.99□□□□□ -0.49
LIMS4-201ENST00000413601 ATP6V1G2O95670 118 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 MAPK3P27361 379 aaPredicted RBP11.99□□□□□ -0.49
LIMS4-201ENST00000413601 GDNFP39905 211 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 HSPA13P48723 471 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 SRSF4Q08170 494 aaKnown RBP11.99□□□□□ -0.49
LIMS4-201ENST00000413601 SSX2Q16385 188 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 AANATQ16613 207 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 ACSM3Q53FZ2 586 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 HEPN1Q6WQI6 88 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 SUMF2Q8NBJ7 301 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 LINC01006Q8NI28 216 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 PLPPR1Q8TBJ4 325 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 PIFOQ8TCI5 191 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 MALSU1Q96EH3 234 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 CNBD2Q96M20 576 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 TMED9Q9BVK6 235 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 SLITRK2Q9H156 845 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 KIF25Q9UIL4 384 aa11.99□□□□□ -0.49
LIMS4-201ENST00000413601 MRPS28Q9Y2Q9 187 aaKnown RBP11.99□□□□□ -0.49
LIMS4-201ENST00000413601 MEIKINA0A087WXM9 373 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 RGS10O43665 173 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF780AO75290 641 aaPredicted RBP11.98□□□□□ -0.49
LIMS4-201ENST00000413601 OR7C1O76099 320 aaPredicted RBP11.98□□□□□ -0.49
LIMS4-201ENST00000413601 GTF2F2P13984 249 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 CRHBPP24387 322 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 RAB13P51153 203 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 FAM189A2Q15884 450 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 C17orf58Q2M2W7 97 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 NHLRC3Q5JS37 347 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 FAM27D1Q5T7N8 215 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 OR52W1Q6IF63 320 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 GLIPR1L1Q6UWM5 242 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 UNQ9370/PRO34162Q6UXP9 181 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 CDH26Q8IXH8 852 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 ABHD12Q8N2K0 398 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 MS4A15Q8N5U1 240 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 OR4D6Q8NGJ1 314 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 OR13A1Q8NGR1 328 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 SGMS2Q8NHU3 365 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 WFDC12Q8WWY7 111 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 THRSPQ92748 146 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 FOXRED1Q96CU9 486 aaPredicted RBP11.98□□□□□ -0.49
LIMS4-201ENST00000413601 DPCDQ9BVM2 203 aaPredicted RBP11.98□□□□□ -0.49
LIMS4-201ENST00000413601 BARHL1Q9BZE3 327 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 CCDC90BQ9GZT6 254 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 IFT22Q9H7X7 185 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 PCDHB16Q9NRJ7 776 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 OR6C3Q9NZP0 311 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 RNF114Q9Y508 228 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 HILPDAQ9Y5L2 63 aa11.98□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF729A6NN14 1252 aaPredicted RBP11.97□□□□□ -0.49
LIMS4-201ENST00000413601 CGB3P0DN86 165 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 CGB7P0DN87 165 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 JUNBP17275 347 aaPredicted RBP11.97□□□□□ -0.49
LIMS4-201ENST00000413601 GLP1RP43220 463 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 GP2P55259 537 aaKnown RBP11.97□□□□□ -0.49
LIMS4-201ENST00000413601 GPR176Q14439 515 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 UTF1Q5T230 341 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 ATAD3CQ5T2N8 411 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 RSBN1Q5VWQ0 802 aaPredicted RBP11.97□□□□□ -0.49
LIMS4-201ENST00000413601 LIPKQ5VXJ0 399 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 AWAT2Q6E213 333 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 SLC35E4Q6ICL7 350 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 BRICD5Q6PL45 260 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 LINC00596Q86U02 117 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 LYPD6Q86Y78 171 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 ZNF565Q8N9K5 539 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 NDNFQ8TB73 568 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 NCOR1P1Q9H4R4 102 aa11.97□□□□□ -0.49
LIMS4-201ENST00000413601 TRAV39A0A0B4J263 110 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 KBTBD11-OT1A0A1B0GTJ5 212 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 VGLL3A8MV65 326 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 CHST1O43916 411 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 TSPAN9O75954 239 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 HSMCR30P0CW71 290 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 NFYBP25208 207 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 HTR1DP28221 377 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 MAP2K4P45985 399 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 KCNJ3P48549 501 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 KRTAP10-3P60369 221 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 GPR50Q13585 617 aa11.96□□□□□ -0.49
LIMS4-201ENST00000413601 MPV17LQ2QL34 196 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms