RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 LHFPL6Q9Y693 200 aa7.43□□□□□ -1.22
SYNE1-211ENST00000413186 A0A0B4J2A0 478 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 SERPINE3A8MV23 424 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 HSPB6O14558 160 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 TIMP3P35625 211 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 GZMKP49863 264 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ERVK-16P61578 105 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 B2MP61769 119 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 KIAA0141Q14154 515 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-211ENST00000413186 EDDM3AQ14507 147 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 GABRA6Q16445 453 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 OR10K2Q6IF99 312 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ADAM5Q6NVV9 412 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 RAB1CQ92928 201 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 NKX3-1Q99801 234 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-211ENST00000413186 GPR61Q9BZJ8 451 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF586Q9NXT0 402 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 SHPKQ9UHJ6 478 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 TINAGQ9UJW2 476 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 IL18BPO95998 194 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 FUT3P21217 361 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 MST1P26927 711 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 HOXA1P49639 335 aaPredicted RBP7.42□□□□□ -1.22
SYNE1-211ENST00000413186 PPT1P50897 306 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 CAV2P51636 162 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 CCR6P51684 374 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 UCP2P55851 309 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 TAS2R30P59541 319 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 LAIR2Q6ISS4 152 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 LRRTM1Q86UE6 522 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 CDH26Q8IXH8 852 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 SNRNP40Q96DI7 357 aaKnown RBP7.42□□□□□ -1.22
SYNE1-211ENST00000413186 AP5S1Q9NUS5 200 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ADAMTS9Q9P2N4 1935 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM210A6NLX4 147 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ABCD4O14678 606 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 SPDEFO95238 335 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 OPCMLQ14982 345 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ST3GAL2Q16842 350 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF695Q8IW36 515 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 C10orf126Q8N4M7 172 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 C9orf106Q8NAJ2 232 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 NHLRC2Q8NBF2 726 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 DCUN1D4Q92564 292 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 RDH5Q92781 318 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 NECAP2Q9NVZ3 263 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 B3GNT2Q9NY97 397 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 SPRR3Q9UBC9 169 aa7.42□□□□□ -1.22
SYNE1-211ENST00000413186 DHRS7CA6NNS2 312 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 DVL1O14640 695 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 HS3ST1O14792 307 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 LMX1BO60663 402 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 RNASE1P07998 156 aaKnown RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 F2RP25116 425 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 DVL1P1P54792 670 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 UBE2MP61081 183 aaKnown RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 LY6DQ14210 128 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 PRSS45Q7RTY3 260 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 SPRY4Q9C004 299 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 CHST5Q9GZS9 411 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 DOK5Q9P104 306 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 KPTNQ9Y664 436 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF716A6NP11 495 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 TSPAN13O95857 204 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 COX6B1P14854 86 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 GGNQ86UU5 652 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 PIK3IP1Q96FE7 263 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 GAB2Q9UQC2 676 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 V9GYH0 126 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 A0A0C4DFX4 3053 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 A0A1W2PPV4 95 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 J3QT63 122 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 SIRPB1O00241 398 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 GPR137BO60478 399 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 FABP1P07148 127 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 HOXD11P31277 338 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 S100A11P31949 105 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 RPL29P47914 159 aaKnown RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 LGALS4P56470 323 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ZNF415Q09FC8 603 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM249Q2WGJ8 235 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ALKBH6Q3KRA9 238 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 TMEM200AQ86VY9 491 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ARRDC1Q8N5I2 433 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ORAI1Q96D31 301 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 FAHD2AQ96GK7 314 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 CHST6Q9GZX3 395 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 SLC25A31Q9H0C2 315 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 MTFP1Q9UDX5 166 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 KLHDC2Q9Y2U9 406 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 CEP192Q8TEP8 1941 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 MEIKINA0A087WXM9 373 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 IGHV3-64DA0A0J9YX35 117 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 ETV2O00321 342 aaPredicted RBP7.41□□□□□ -1.22
SYNE1-211ENST00000413186 NDUFB3O43676 98 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 EFNA2O43921 213 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 LALBAP00709 142 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 LRRC10Q5BKY1 277 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 SAMD13Q5VXD3 122 aa7.41□□□□□ -1.22
SYNE1-211ENST00000413186 FDX2Q6P4F2 183 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms