RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 IL24Q13007 206 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 GNMTQ14749 295 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF169Q14929 603 aaPredicted RBP9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TSC22D1Q15714 1073 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM74A3Q4VXF1 159 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF766Q5HY98 468 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TBC1D26Q86UD7 250 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF695Q8IW36 515 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TMEM56Q96MV1 263 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 SEC11CQ9BY50 192 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 ARV1Q9H2C2 271 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 POMT1Q9Y6A1 747 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TMEM56-RWDD3S4R434 201 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TNRC6AQ8NDV7 1962 aaKnown RBP9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 HSPB6O14558 160 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TOR1AO14656 332 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 SEC11BP0C7V7 166 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TGIF1Q15583 401 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 GUCA2BQ16661 112 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 BTNL8Q6UX41 500 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 OR4D5Q8NGN0 318 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 SPIN2AQ99865 258 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 SPIN2BQ9BPZ2 258 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 PKIBQ9C010 78 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 TMEM231Q9H6L2 316 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 SPRR3Q9UBC9 169 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 FREM2Q5SZK8 3169 aa9.82□□□□□ -0.84
TRAFD1-202ENST00000412615 MUC3AQ02505 3323 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 TUSC2O75896 110 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 IL32P24001 234 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 ATP1A1-AS1Q5TC04 95 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 MDP1Q86V88 176 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM58AQ8N1B3 248 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 SUMF2Q8NBJ7 301 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 CLRN3Q8NCR9 226 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 DMBX1Q8NFW5 382 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 TLNRD1Q9H1K6 362 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 OR51B6Q9H340 312 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 PURGQ9UJV8 347 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF175Q9Y473 711 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 RNASEK-C17orf49H0YIS7 233 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 SNAPINO95295 136 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 FOSL1P15407 271 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 MUC1P15941 1255 aaPredicted RBP9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 SOX8P57073 446 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 HERPUD1Q15011 391 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 OR2T2Q6IF00 324 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 CLEC9AQ6UXN8 241 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 Q6ZRG5 221 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 CMTM1Q8IZ96 169 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 GAPTQ8N292 157 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 NRIP2Q9BQI9 281 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 ZDHHC11Q9H8X9 412 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 PLA2G2EQ9NZK7 142 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 LHX6Q9UPM6 363 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 RCL1Q9Y2P8 373 aaKnown RBP9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 GPR179Q6PRD1 2367 aa9.81□□□□□ -0.84
TRAFD1-202ENST00000412615 TRBV6-6A0A0A6YYG2 114 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 DUXBA0A1W2PPF3 345 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 NKX2-6A6NCS4 301 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 J3QW42 95 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 HS3ST1O14792 307 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 LILRA1O75019 489 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 PVALBP20472 110 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 CA6P23280 308 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 NKX2-1P43699 371 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 MRPL49Q13405 166 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 TBC1D28Q2M2D7 210 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 RNFT1Q5M7Z0 435 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM122CQ6P4D5 195 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF818PQ6ZRF7 136 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 MRPL30Q8TCC3 161 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 ZNF488Q96MN9 340 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 USB1Q9BQ65 265 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 GINS3Q9BRX5 216 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 OR51I2Q9H344 312 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 ZDHHC8Q9ULC8 765 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 WDFY4Q6ZS81 3184 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 KNTC1P50748 2209 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 NOVA1P51513 510 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 TRIP6Q15654 476 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 P4HA3Q7Z4N8 544 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 C5orf24Q7Z6I8 188 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 SELENOHQ8IZQ5 122 aaKnown RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 LYPD6BQ8NI32 183 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 RDH5Q92781 318 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 BSCL2Q96G97 398 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 GMPPAQ96IJ6 420 aaPredicted RBP9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 WFDC1Q9HC57 220 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM96BQ9Y3D0 163 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 SHANK1Q9Y566 2161 aa9.8□□□□□ -0.84
TRAFD1-202ENST00000412615 IGKV1-6A0A0C4DH72 117 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 J3QT63 122 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 HSD17B6O14756 317 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 SPP1P10451 314 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 S100GP29377 79 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 NHLH2Q02577 135 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 TGFBR3Q03167 851 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 FAM76BQ5HYJ3 339 aa9.79□□□□□ -0.84
TRAFD1-202ENST00000412615 ABHD14BQ96IU4 210 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms