RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CHAC1Q9BUX1 264 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 GGTLC1Q9BX51 225 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 PARVAQ9NVD7 372 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 VPS29Q9UBQ0 182 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 DKKL1Q9UK85 242 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 SLC22A7Q9Y694 548 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF780BQ9Y6R6 833 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 EIF3AQ14152 1382 aaKnown RBP3.17□□□□□ -1.9
BRCA1-204ENST00000412061 TRAF3IP2O43734 574 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-204ENST00000412061 SS18L1O75177 396 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-204ENST00000412061 OR2A4O95047 310 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 SLC25A14O95258 325 aaPredicted RBP3.17□□□□□ -1.9
BRCA1-204ENST00000412061 IGLV2-8P01709 118 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 OR4Q2P0C623 313 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 CECR9P0C854 216 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 TGFBR2P37173 567 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 REG1BP48304 166 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 UBE2AP49459 152 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 CRISP3P54108 245 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 H2BFSP57053 126 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 DSCR10P59022 87 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 ARPC4P59998 168 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 NAA20P61599 178 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 PPP1CAP62136 330 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 MPV17L2Q567V2 206 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 CLLU1OSQ5K130 101 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 SLC25A30Q5SVS4 291 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 C9orf129Q5T035 196 aaKnown RBP3.17□□□□□ -1.9
BRCA1-204ENST00000412061 NXNL2Q5VZ03 156 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF774Q6NX45 483 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 CLEC20AQ6ZU45 233 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 OLIG3Q7RTU3 272 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 C6orf120Q7Z4R8 191 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 LINC00596Q86U02 117 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF584Q8IVC4 421 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 DCAF4L2Q8NA75 395 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF680Q8NEM1 530 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 OR10X1Q8NGY0 326 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 TEX47Q8TBZ9 253 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 FAM172AQ8WUF8 416 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 TMEM158Q8WZ71 300 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 TMBIM1Q969X1 311 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 RAD51AP1Q96B01 352 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 OR2A7Q96R45 310 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 PRSS27Q9BQR3 290 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 ANAPC13Q9BS18 74 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 EBPLQ9BY08 206 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 MMP26Q9NRE1 261 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 GLS2Q9UI32 602 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 FBXO5Q9UKT4 447 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 RAB26Q9ULW5 256 aa3.17□□□□□ -1.9
BRCA1-204ENST00000412061 PBRM1Q86U86 1689 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 CAMSAP1Q5T5Y3 1602 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 A0A0G2JMP0 313 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 A0A0X1KG70 313 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 M0QYV0 167 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 GYG2O15488 501 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 COX7A2P2O60397 106 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 KCNK2O95069 426 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 REG1AP05451 166 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF708P17019 499 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 C1QTNF8P60827 252 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 SPCS3P61009 180 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 SSX1Q16384 188 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF684Q5T5D7 378 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 HIST2H3PS2Q5TEC6 136 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF544Q6NX49 715 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 LRRC25Q8N386 305 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-204ENST00000412061 TBC1D19Q8N5T2 526 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 OR11L1Q8NGX0 322 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 TWIST2Q8WVJ9 160 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 RTBDNQ9BSG5 229 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-204ENST00000412061 TSGA10Q9BZW7 698 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF436Q9C0F3 470 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-204ENST00000412061 FGF23Q9GZV9 251 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-204ENST00000412061 TAS2R5Q9NYW4 299 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF225Q9UK10 706 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 C14orf166Q9Y224 244 aaKnown RBP3.16□□□□□ -1.9
BRCA1-204ENST00000412061 POMPQ9Y244 141 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 BTRCQ9Y297 605 aa3.16□□□□□ -1.9
BRCA1-204ENST00000412061 IGHV2-26A0A0B4J1V2 119 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 IGHV3-66A0A0C4DH42 116 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 A0A1B0GUA9 196 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CHP2O43745 196 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CYB5R3P00387 301 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 IL3P08700 152 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 MSNP26038 577 aaKnown RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 NUDT1P36639 197 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 RPL19P84098 196 aaKnown RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 KRR1Q13601 381 aaKnown RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 PAFAH1B3Q15102 231 aaKnown RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 PTGES3Q15185 160 aaKnown RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CENPWQ5EE01 88 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 ACSBG2Q5FVE4 666 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 FAM222AQ5U5X8 452 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 SFXN4Q6P4A7 337 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms