RNA–Protein interactions for RNA: ENST00000411552.5

NOD1-202, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-202ENST00000411552 FBP1P09467 338 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 GABRA5P31644 462 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 FABP5Q01469 135 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 SSX1Q16384 188 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 MIDNQ504T8 468 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 LINC00596Q86U02 117 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 LDLRAD3Q86YD5 345 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 SPARTQ8N0X7 666 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 SVOPQ8N4V2 548 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 C17orf50Q8WW18 174 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 SSMEM1Q8WWF3 244 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 AJUBAQ96IF1 538 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 TNFRSF19Q9NS68 423 aa13.3□□□□□ -0.28
NOD1-202ENST00000411552 CLPXO76031 633 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 IGHV4-59P01825 116 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 IER3P46695 156 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 TAF9Q16594 264 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 TMEM86BQ8N661 226 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 SUMF2Q8NBJ7 301 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 TMEM104Q8NE00 496 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 PLPPR1Q8TBJ4 325 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 CORO2AQ92828 525 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 GCDHQ92947 438 aaPredicted RBP13.29□□□□□ -0.28
NOD1-202ENST00000411552 FOXRED1Q96CU9 486 aaPredicted RBP13.29□□□□□ -0.28
NOD1-202ENST00000411552 MRPS24Q96EL2 167 aaKnown RBP13.29□□□□□ -0.28
NOD1-202ENST00000411552 DPCDQ9BVM2 203 aaPredicted RBP13.29□□□□□ -0.28
NOD1-202ENST00000411552 BANF2Q9H503 90 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 NDUFB11Q9NX14 153 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 ZNRD1Q9P1U0 126 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 KIF25Q9UIL4 384 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 LRRC42Q9Y546 428 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 SESN1Q9Y6P5 492 aa13.29□□□□□ -0.28
NOD1-202ENST00000411552 CRTAPO75718 401 aaPredicted RBP13.28□□□□□ -0.28
NOD1-202ENST00000411552 MMP23AO75900 390 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 ARL6IP5O75915 188 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 PAHP00439 452 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 MGMTP16455 207 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 KCNJ3P48549 501 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 PAX5Q02548 391 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 MPV17LQ2QL34 196 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 C1orf100Q5SVJ3 147 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 PRAMEF5Q5TYX0 476 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 UBE2UQ5VVX9 321 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 GLT8D1Q68CQ7 371 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 OR13D1Q8NGV5 346 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 CHIAQ9BZP6 476 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 SLITRK2Q9H156 845 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 GAL3ST2Q9H3Q3 398 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 TAS2R3Q9NYW6 316 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 POMT1Q9Y6A1 747 aa13.28□□□□□ -0.28
NOD1-202ENST00000411552 MEIKINA0A087WXM9 373 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 TMEM89A2RUT3 159 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 ODF3BA8MYP8 253 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 CD37P11049 281 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 ATAD3CQ5T2N8 411 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 RSBN1Q5VWQ0 802 aaPredicted RBP13.27□□□□□ -0.29
NOD1-202ENST00000411552 C16orf87Q6PH81 154 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 ZNF773Q6PK81 442 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 BRICD5Q6PL45 260 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 OR11H6Q8NGC7 330 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 FAM46BQ96A09 425 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 GFI1Q99684 422 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 BARHL1Q9BZE3 327 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 SELENOIQ9C0D9 397 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 NCOR1P1Q9H4R4 102 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 OR6C3Q9NZP0 311 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 GHRLQ9UBU3 117 aa13.27□□□□□ -0.29
NOD1-202ENST00000411552 SLC22A1O15245 554 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 ARG1P05089 322 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 UBBP0CG47 229 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 CDK2P24941 298 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 PAX6P26367 422 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 CALRP27797 417 aaKnown RBP13.26□□□□□ -0.29
NOD1-202ENST00000411552 PSMB9P28065 219 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 HTR2CP28335 458 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 GDNFP39905 211 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 GLP1RP43220 463 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 LGALS4P56470 323 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 C17orf58Q2M2W7 97 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 BAIAP2L2Q6UXY1 529 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 HEPN1Q6WQI6 88 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 LHFPL4Q7Z7J7 247 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 BEND2Q8NDZ0 799 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 OR13A1Q8NGR1 328 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 FCGR1BQ92637 280 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 TAF15Q92804 592 aaKnown RBP eCLIP13.26□□□□□ -0.29
NOD1-202ENST00000411552 Q96M66 194 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 CST11Q9H112 138 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 TMEM133Q9H2Q1 129 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 DPAGT1Q9H3H5 408 aa13.26□□□□□ -0.29
NOD1-202ENST00000411552 RCC2Q9P258 522 aaKnown RBP13.26□□□□□ -0.29
NOD1-202ENST00000411552 AK6Q9Y3D8 172 aaKnown RBP13.26□□□□□ -0.29
NOD1-202ENST00000411552 IGHV2-26A0A0B4J1V2 119 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 FAM181BA6NEQ2 426 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 ZNF729A6NN14 1252 aaPredicted RBP13.25□□□□□ -0.29
NOD1-202ENST00000411552 CCRL2O00421 344 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 CGB3P0DN86 165 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 CGB7P0DN87 165 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 HKR1P10072 659 aa13.25□□□□□ -0.29
NOD1-202ENST00000411552 OMGP23515 440 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms