RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 GABPB1Q06547 395 aaPredicted RBP15.36■□□□□ 0.05
SF3A1-202ENST00000411423 MED21Q13503 144 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 RIPK1Q13546 671 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 IL13RA2Q14627 380 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 INSL4Q14641 139 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 RSU1Q15404 277 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 KIAA2026Q5HYC2 2103 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 C6orf141Q5SZD1 244 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 HEPN1Q6WQI6 88 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 TMEM219Q86XT9 240 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 LYPD6Q86Y78 171 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 OR13A1Q8NGR1 328 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 ZNF184Q99676 751 aaPredicted RBP15.36■□□□□ 0.05
SF3A1-202ENST00000411423 CLEC7AQ9BXN2 247 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 IL36GQ9NZH8 169 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 TCF19Q9Y242 345 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 HILPDAQ9Y5L2 63 aa15.36■□□□□ 0.05
SF3A1-202ENST00000411423 TRAV39A0A0B4J263 110 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 CDK1P06493 297 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 CELP19835 753 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 FSTP19883 344 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 PPP3R1P63098 170 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 PAN3Q58A45 887 aaKnown RBP15.35■□□□□ 0.05
SF3A1-202ENST00000411423 RSBN1Q5VWQ0 802 aaPredicted RBP15.35■□□□□ 0.05
SF3A1-202ENST00000411423 ABHD12Q8N2K0 398 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 FOXRED1Q96CU9 486 aaPredicted RBP15.35■□□□□ 0.05
SF3A1-202ENST00000411423 DERL3Q96Q80 235 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 OR5M11Q96RB7 305 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 FBLN5Q9UBX5 448 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 KIF25Q9UIL4 384 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 VWFP04275 2813 aa15.35■□□□□ 0.05
SF3A1-202ENST00000411423 MGAM2Q2M2H8 2515 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 GEMIN2O14893 280 aaKnown RBP15.34■□□□□ 0.05
SF3A1-202ENST00000411423 MYL12BO14950 172 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 IGLV1-47P01700 117 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 SERPINA2P20848 420 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 EFNB2P52799 333 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 GP2P55259 537 aaKnown RBP15.34■□□□□ 0.05
SF3A1-202ENST00000411423 RBM11P57052 281 aaKnown RBP15.34■□□□□ 0.05
SF3A1-202ENST00000411423 NHLRC3Q5JS37 347 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 MINOS1Q5TGZ0 78 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 TREML4Q6UXN2 200 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 OSR2Q8N2R0 312 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 CPNE2Q96FN4 548 aaPredicted RBP15.34■□□□□ 0.05
SF3A1-202ENST00000411423 METTL9Q9H1A3 318 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 GAL3ST2Q9H3Q3 398 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 ST3GAL6Q9Y274 331 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 LSM2Q9Y333 95 aaKnown RBP15.34■□□□□ 0.05
SF3A1-202ENST00000411423 MINOS1-NBL1R4GNA1 71 aa15.34■□□□□ 0.05
SF3A1-202ENST00000411423 MEGF8Q7Z7M0 2845 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 FUOMA2VDF0 154 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 ERICH4A6NGS2 130 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 CD1AP06126 327 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 CD34P28906 385 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 KIR2DS4P43632 304 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 TAS2R43P59537 309 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 HABP2Q14520 560 aaPredicted RBP15.33■□□□□ 0.04
SF3A1-202ENST00000411423 Q6ZS46 218 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 SUMF2Q8NBJ7 301 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 NDNFQ8TB73 568 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 MUL1Q969V5 352 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 KIRREL1Q96J84 757 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 VCXQ9H320 206 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 ZNF702PQ9H963 129 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 FOXJ3Q9UPW0 622 aa15.33■□□□□ 0.04
SF3A1-202ENST00000411423 A0A087X0M5 115 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 KBTBD11-OT1A0A1B0GTJ5 212 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 A0A1B0GX30 115 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 ZNF729A6NN14 1252 aaPredicted RBP15.32■□□□□ 0.04
SF3A1-202ENST00000411423 PTGES3LE9PB15 166 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 MAS1P04201 325 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 GABRA5P31644 462 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 GLP1RP43220 463 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 IRF3Q14653 427 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 FAM27D1Q5T7N8 215 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 RNLSQ5VYX0 342 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 OR4D6Q8NGJ1 314 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 MRGPRDQ8TDS7 321 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 LEAP2Q969E1 77 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 DPCDQ9BVM2 203 aaPredicted RBP15.32■□□□□ 0.04
SF3A1-202ENST00000411423 CDCA4Q9BXL8 241 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 IFT22Q9H7X7 185 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 CALYQ9NYX4 217 aa15.32■□□□□ 0.04
SF3A1-202ENST00000411423 MEIKINA0A087WXM9 373 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 FAM90A22PA8MWA6 464 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 IGHV3-7P01780 117 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 CD24P25063 80 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 HTR1DP28221 377 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 DYNLT3P51808 116 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 SLC35A2P78381 396 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 BDH1Q02338 343 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 PAX5Q02548 391 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 SLC22A6Q4U2R8 563 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 TCF7L1Q9HCS4 588 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 OR6C3Q9NZP0 311 aa15.31■□□□□ 0.04
SF3A1-202ENST00000411423 LY6LH3BQJ8 138 aa15.3■□□□□ 0.04
SF3A1-202ENST00000411423 OR7C1O76099 320 aaPredicted RBP15.3■□□□□ 0.04
SF3A1-202ENST00000411423 TSPAN15O95858 294 aa15.3■□□□□ 0.04
SF3A1-202ENST00000411423 NFYBP25208 207 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms