RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 RHOAP61586 193 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 DPPA2Q7Z7J5 298 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 SGPP2Q8IWX5 399 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 OR8S1Q8NH09 359 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 DYNC2LI1Q8TCX1 351 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 CCDC12Q8WUD4 166 aaPredicted RBP2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 LINC01587Q99440 93 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 TAPBPLQ9BX59 468 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 ZNF436Q9C0F3 470 aaPredicted RBP2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 COMMD9Q9P000 198 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 SHANK1Q9Y566 2161 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 POLR3AO14802 1390 aaPredicted RBP2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 PLXNB3Q9ULL4 1909 aa2.21□□□□□ -2.06
RNU2-28P-201ENST00000410457 IGHV3-21A0A0B4J1V1 117 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 TMEM250H0YL14 139 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 ISLRO14498 428 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 TOR1AO14656 332 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 TOX3O15405 576 aaPredicted RBP2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 PFN1P07737 140 aaKnown RBP2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 MLNP12872 115 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 GTF2F2P13984 249 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 SPNP16150 400 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 AKR1C4P17516 323 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 CBX5P45973 191 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 STC1P52823 247 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 RAB25P57735 213 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 RAB8AP61006 207 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 FLI1Q01543 452 aaPredicted RBP2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 TIMM23BQ5SRD1 257 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 NXNL2Q5VZ03 156 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 AMN1Q8IY45 258 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 GATD1Q8NB37 220 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 DTD1Q8TEA8 209 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 C2orf15Q8WU43 125 aaKnown RBP2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 CLDN23Q96B33 292 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 FAM210AQ96ND0 272 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 PRR14LQ5THK1 2151 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
RNU2-28P-201ENST00000410457 ATRNO75882 1429 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 IGHV1-45A0A0A0MS14 117 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 LEUTXA8MZ59 168 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 C9J4A7 227 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 SMLR1H3BR10 107 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 K7ERS5 55 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 MPZL2O60487 215 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 POP7O75817 140 aaKnown RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 RAB36O95755 333 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 EPPINO95925 133 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 IGHG2P01859 326 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 HLA-AP01891 365 aaKnown RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 ATF1P18846 271 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 FAM3AP98173 230 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 NIPAL1Q6NVV3 410 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 TMEM136Q6ZRR5 245 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 CLEC20AQ6ZU45 233 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 RPRMLQ8N4K4 120 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 ZNF680Q8NEM1 530 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 C1orf64Q8NEQ6 169 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 ATP6V1C2Q8NEY4 427 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 OR4C13Q8NGP0 309 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 FXYD5Q96DB9 178 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 PYURFQ96I23 114 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 PRSS27Q9BQR3 290 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 EBPLQ9BY08 206 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 UGT2B28Q9BY64 529 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 ULBP1Q9BZM6 244 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 OR51E2Q9H255 320 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 TXNIPQ9H3M7 391 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 VSIRQ9H7M9 311 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 TRIM45Q9H8W5 580 aaPredicted RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 ZNHIT6Q9NWK9 470 aaKnown RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 EURLQ9NYK6 297 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 FBXL3Q9UKT7 428 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 SCML1Q9UN30 329 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 YLPM1P49750 1951 aaKnown RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 COL1A2P08123 1366 aa2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 NUP153P49790 1475 aaKnown RBP2.19□□□□□ -2.06
RNU2-28P-201ENST00000410457 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 EFCAB9A8MZ26 197 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 C8orf87E5RJ46 101 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 F5H5P2 479 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 GOLGA8RI6L899 631 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 J3QLI3 93 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 RD3LP0DJH9 198 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 INAFM2P0DMQ5 153 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 DLX6P56179 175 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 RPS11P62280 158 aaKnown RBP eCLIP2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 BIKQ13323 160 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 ZNHIT3Q15649 155 aaPredicted RBP2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 OLIG3Q7RTU3 272 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 BOD1L2Q8IYS8 172 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 ZFP82Q8N141 532 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 MUC15Q8N387 334 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 C3orf22Q8N5N4 141 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 OR1P1Q8NH06 330 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 RBPMSQ93062 196 aaKnown RBP2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 TMEM56Q96MV1 263 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 WDR54Q9H977 334 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 POMPQ9Y244 141 aa2.18□□□□□ -2.06
RNU2-28P-201ENST00000410457 TBL2Q9Y4P3 447 aaKnown RBP2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms